RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ROM1Q03395 351 aa12.49□□□□□ -0.41
USB1-203ENST00000539737 SNAI3Q3KNW1 292 aa12.49□□□□□ -0.41
USB1-203ENST00000539737 LRRN1Q6UXK5 716 aa12.49□□□□□ -0.41
USB1-203ENST00000539737 BRD3OSQ6XYD6 125 aa12.49□□□□□ -0.41
USB1-203ENST00000539737 Q6ZR03 302 aa12.49□□□□□ -0.41
USB1-203ENST00000539737 NAA40Q86UY6 237 aa12.49□□□□□ -0.41
USB1-203ENST00000539737 OR52H1Q8NGJ2 320 aa12.49□□□□□ -0.41
USB1-203ENST00000539737 TMIGD2Q96BF3 282 aa12.49□□□□□ -0.41
USB1-203ENST00000539737 APOL4Q9BPW4 351 aa12.49□□□□□ -0.41
USB1-203ENST00000539737 MS4A7Q9GZW8 240 aaPredicted RBP12.49□□□□□ -0.41
USB1-203ENST00000539737 OR10A2Q9H208 303 aa12.49□□□□□ -0.41
USB1-203ENST00000539737 TMEM106BQ9NUM4 274 aa12.49□□□□□ -0.41
USB1-203ENST00000539737 LRP12Q9Y561 859 aa12.49□□□□□ -0.41
USB1-203ENST00000539737 TRAV40A0A0B4J280 105 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 LOC100130705A0A1B0GUX0 176 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 CASQ2O14958 399 aaPredicted RBP12.48□□□□□ -0.41
USB1-203ENST00000539737 SLC16A6O15403 523 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 HOXA3O43365 443 aaPredicted RBP12.48□□□□□ -0.41
USB1-203ENST00000539737 TBX1O43435 398 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 ZNF254O75437 659 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 SLC2A1P11166 492 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 CFL1P23528 166 aaKnown RBP12.48□□□□□ -0.41
USB1-203ENST00000539737 ATP6V1E1P36543 226 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 SRP9P49458 86 aaKnown RBP12.48□□□□□ -0.41
USB1-203ENST00000539737 ZNF121P58317 390 aaPredicted RBP12.48□□□□□ -0.41
USB1-203ENST00000539737 RELBQ01201 579 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 OCLNQ16625 522 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 TIGD6Q17RP2 521 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 LRRC36Q1X8D7 754 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 ZNF829Q3KNS6 432 aaPredicted RBP12.48□□□□□ -0.41
USB1-203ENST00000539737 GLYATL3Q5SZD4 288 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 OGFRL1Q5TC84 451 aaPredicted RBP12.48□□□□□ -0.41
USB1-203ENST00000539737 LPCAT4Q643R3 524 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 HIST2H2BDQ6DRA6 164 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 OR2T2Q6IF00 324 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 OR5AS1Q8N127 324 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 MUC20Q8N307 709 aaPredicted RBP12.48□□□□□ -0.41
USB1-203ENST00000539737 GALNT4Q8N4A0 578 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 OR8G5Q8NG78 346 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 OR13G1Q8NGZ3 307 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 ITLN1Q8WWA0 313 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 OR8B4Q96RC9 309 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 SIGLEC11Q96RL6 698 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 RGCCQ9H4X1 137 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 PATZ1Q9HBE1 687 aaKnown RBP12.48□□□□□ -0.41
USB1-203ENST00000539737 FAM118AQ9NWS6 357 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 IKZF2Q9UKS7 526 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 COPS3Q9UNS2 423 aa12.48□□□□□ -0.41
USB1-203ENST00000539737 NOP16Q9Y3C1 178 aaKnown RBP12.48□□□□□ -0.41
USB1-203ENST00000539737 LRRC30A6NM36 301 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 ENTPD6O75354 484 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 DCTDP32321 178 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 MTNR1AP48039 350 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 RIDAP52758 137 aaKnown RBP12.47□□□□□ -0.41
USB1-203ENST00000539737 HCCSP53701 268 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 CXCR4P61073 352 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 ACTC1P68032 377 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 ACTA1P68133 377 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 IL13RA1P78552 427 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 EGR3Q06889 387 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 DEFB112Q30KQ8 113 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 TMEM155Q4W5P6 130 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 FAM201AQ5SY85 155 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 RUSC1-AS1Q66K80 236 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 ZNF322Q6U7Q0 402 aaPredicted RBP12.47□□□□□ -0.41
USB1-203ENST00000539737 FAM57BQ71RH2 274 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 PRSS45Q7RTY3 260 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 ENTHD1Q8IYW4 607 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 ZNF679Q8IYX0 411 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 C1orf87Q8N0U7 546 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 BHLHE23Q8NDY6 225 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 OR2AE1Q8NHA4 323 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 ZNF420Q8TAQ5 688 aaPredicted RBP12.47□□□□□ -0.41
USB1-203ENST00000539737 SPRYD4Q8WW59 207 aaPredicted RBP12.47□□□□□ -0.41
USB1-203ENST00000539737 WFDC12Q8WWY7 111 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 SPSB4Q96A44 273 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 SLC25A28Q96A46 364 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 PGAM5Q96HS1 289 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 Q96MT0 163 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 OR2V2Q96R30 315 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 ZNF391Q9UJN7 358 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 N6AMT1Q9Y5N5 214 aa12.47□□□□□ -0.41
USB1-203ENST00000539737 GGT3PA6NGU5 568 aa12.46□□□□□ -0.41
USB1-203ENST00000539737 ACOD1A6NK06 481 aa12.46□□□□□ -0.41
USB1-203ENST00000539737 F5H0A9 414 aaPredicted RBP12.46□□□□□ -0.41
USB1-203ENST00000539737 H0YHG0 523 aa12.46□□□□□ -0.41
USB1-203ENST00000539737 OR2T7P0C7T2 308 aa12.46□□□□□ -0.41
USB1-203ENST00000539737 IRF2P14316 349 aa12.46□□□□□ -0.41
USB1-203ENST00000539737 GABRB1P18505 474 aa12.46□□□□□ -0.41
USB1-203ENST00000539737 PRSS12P56730 875 aa12.46□□□□□ -0.41
USB1-203ENST00000539737 BTG1P62324 171 aa12.46□□□□□ -0.41
USB1-203ENST00000539737 ZNF92Q03936 586 aa12.46□□□□□ -0.41
USB1-203ENST00000539737 SLC34A1Q06495 639 aa12.46□□□□□ -0.41
USB1-203ENST00000539737 ESCO2Q56NI9 601 aa12.46□□□□□ -0.41
USB1-203ENST00000539737 TTC23Q5W5X9 447 aa12.46□□□□□ -0.41
USB1-203ENST00000539737 OR10H4Q8NGA5 316 aa12.46□□□□□ -0.41
USB1-203ENST00000539737 OR2T27Q8NH04 317 aa12.46□□□□□ -0.41
USB1-203ENST00000539737 REEP6Q96HR9 211 aa12.46□□□□□ -0.41
USB1-203ENST00000539737 SLC30A2Q9BRI3 323 aa12.46□□□□□ -0.41
USB1-203ENST00000539737 MRI1Q9BV20 369 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms