RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 GAB4Q2WGN9 574 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 HIKESHIQ53FT3 197 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 C20orf196Q8IYI0 205 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 OR2G2Q8NGZ5 317 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 OR56B4Q8NH76 319 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 RPS10P5Q9NQ39 176 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 SLC39A9Q9NUM3 307 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 URB1O60287 2271 aaKnown RBP4.78□□□□□ -1.64
LRP6-203ENST00000538239 IGHV3-13P01766 116 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 IGHV3-7P01780 117 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 RAF1P04049 648 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 FABP1P07148 127 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 MGMTP16455 207 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 ERHP84090 104 aaKnown RBP4.78□□□□□ -1.64
LRP6-203ENST00000538239 CDK5R1Q15078 307 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 ZNF141Q15928 474 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 STUMQ69YW2 141 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 SLC23A3Q6PIS1 610 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 C9orf40Q8IXQ3 194 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 TMEM104Q8NE00 496 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 ASB10Q8WXI3 467 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 RPEQ96AT9 228 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 SMIM19Q96E16 107 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 SEC22CQ9BRL7 303 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 TMEM30CPA0ZSE6 113 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 TGM6O95932 706 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 ADH4P08319 380 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 CD96P40200 585 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 SLC37A1P57057 533 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 BAMBIQ13145 260 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 TESK1Q15569 626 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 UBE3DQ7Z6J8 389 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 THNSL2Q86YJ6 484 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 OR2M2Q96R28 347 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 TAAR6Q96RI8 345 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 DDA1Q9BW61 102 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 COMMD5Q9GZQ3 224 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 SIAEQ9HAT2 523 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 PCOLCE2Q9UKZ9 415 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 COPS3Q9UNS2 423 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 FLVCR1Q9Y5Y0 555 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 IGHV3-43A0A0B4J1X8 118 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 POM121CA8CG34 1229 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 AGAP14A8MT82 685 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 GMDSO60547 372 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 IGHV3-43DP0DP04 118 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 NME2P22392 152 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 SELENOPP49908 381 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 KIAA0040Q15053 153 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 OR52I2Q8NH67 350 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 MOGAT1Q96PD6 335 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 CPNE5Q9HCH3 593 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 SIRT3Q9NTG7 399 aaPredicted RBP4.78□□□□□ -1.64
LRP6-203ENST00000538239 DOCK3Q8IZD9 2030 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 LNP1A1A4G5 178 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 M0QZ24 198 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 CYR61O00622 381 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 ARPC3O15145 178 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 SSSCA1O60232 199 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 SIX6O95475 246 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 PI3P19957 117 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 RAC3P60763 192 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 ISL1P61371 349 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 SPANXN5Q5MJ07 72 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.78□□□□□ -1.64
LRP6-203ENST00000538239 FAAP20Q6NZ36 180 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 RAB1CQ92928 201 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 TMEM230Q96A57 120 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 UCN2Q96RP3 112 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 OPN3Q9H1Y3 402 aaPredicted RBP4.78□□□□□ -1.64
LRP6-203ENST00000538239 CXXC4Q9H2H0 198 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 LIN7CQ9NUP9 197 aaKnown RBP4.78□□□□□ -1.64
LRP6-203ENST00000538239 PURGQ9UJV8 347 aaKnown RBP4.78□□□□□ -1.64
LRP6-203ENST00000538239 ARRDC5A6NEK1 342 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 ADAM20O43506 726 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 FABP5Q01469 135 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 ZNF529Q6P280 563 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 Q6ZRG5 221 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 TSEN54Q7Z6J9 526 aaKnown RBP4.78□□□□□ -1.64
LRP6-203ENST00000538239 ZFP62Q8NB50 900 aaPredicted RBP4.78□□□□□ -1.64
LRP6-203ENST00000538239 OR8B3Q8NGG8 313 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 OR8B2Q96RD0 313 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 ARPC5LQ9BPX5 153 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 SIGLEC7Q9Y286 467 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 CROCCQ5TZA2 2017 aa4.78□□□□□ -1.64
LRP6-203ENST00000538239 TUBGCP6Q96RT7 1819 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 TMPRSS2O15393 492 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 FADS1O60427 444 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 CLN5O75503 358 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 OR5G3P0C626 314 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 TBPP20226 339 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 HRH1P35367 487 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 ZFP36L2P47974 494 aaKnown RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 PCBP3P57721 371 aaKnown RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 NPEPL1Q8NDH3 523 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 TMEM52Q8NDY8 209 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 OR2M3Q8NG83 312 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 ZNF721Q8TF20 911 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 SLC7A6Q92536 515 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 SLC25A46Q96AG3 418 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms