RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 PRRX1P54821 245 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 LILRA4P59901 499 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 UBE2G2P60604 165 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 PFN3P60673 137 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 GPR18Q14330 331 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 ARL6IP1Q15041 203 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 ENTPD8Q5MY95 495 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 SLC25A30Q5SVS4 291 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 C1orf194Q5T5A4 169 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 TPTE2P1Q5T6R2 138 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 RPUSD3Q6P087 351 aaKnown RBP3.31□□□□□ -1.88
MCF2-210ENST00000536274 WDR73Q6P4I2 378 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 CD300LGQ6UXG3 332 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 STAC2Q6ZMT1 411 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 ZNF66Q6ZN08 573 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 DPY19L2P2Q6ZN68 376 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 SLCO4C1Q6ZQN7 724 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 COMMD6Q7Z4G1 85 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 ADIPOR2Q86V24 386 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 ZNF429Q86V71 674 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 TMEM123Q8N131 208 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 DTWD2Q8NBA8 298 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 CLEC1AQ8NC01 280 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 MARCH1Q8TCQ1 289 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 RLN3Q8WXF3 142 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 FOXN4Q96NZ1 517 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 OR5B2Q96R09 309 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 OR11A1Q9GZK7 315 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 SLC26A1Q9H2B4 701 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 ZNF160Q9HCG1 818 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 CLDND1Q9NY35 253 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 CALML5Q9NZT1 146 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 LUZP4Q9P127 313 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 TAAR2Q9P1P5 351 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 ZNF319Q9P2F9 582 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 CYP8B1Q9UNU6 501 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 RNF114Q9Y508 228 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 MRPS18BQ9Y676 258 aaKnown RBP3.31□□□□□ -1.88
MCF2-210ENST00000536274 PLXNB3Q9ULL4 1909 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 C2orf16Q68DN1 1984 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 A0A0A6YYH2 397 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 CCDC163A0A0D9SF12 145 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 A0A1W2PQH9 124 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 ARRDC5A6NEK1 342 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 TMEM202A6NGA9 273 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 A6NJ64 397 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 F6UZH7 168 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 HSD17B6O14756 317 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 BNIP3LO60238 219 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 RAMP2O60895 175 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 CTAG2O75638 210 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 WNT11O96014 354 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 TK1P04183 234 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 DBHP09172 617 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 OR2T7P0C7T2 308 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 ZNF735P0CB33 412 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 RHOQP17081 205 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 MAKP20794 623 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 BCKDHBP21953 392 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 CHATP28329 748 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 TEAD1P28347 426 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 NTSR1P30989 418 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 PRSS3P35030 304 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 FAUP35544 74 aaKnown RBP3.31□□□□□ -1.88
MCF2-210ENST00000536274 OR3A2P47893 321 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 RPL19P84098 196 aaKnown RBP3.31□□□□□ -1.88
MCF2-210ENST00000536274 H3F3AP84243 136 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 EFEMP1Q12805 493 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 RTP5Q14D33 572 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 SAMD5Q5TGI4 173 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 C1orf189Q5VU69 101 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 FBXL22Q6P050 247 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.31□□□□□ -1.88
MCF2-210ENST00000536274 MDGA2Q7Z553 956 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 SPRED2Q7Z698 418 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 ATOH7Q8N100 152 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 SLC39A11Q8N1S5 342 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 NXPE1Q8N323 547 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 CADM4Q8NFZ8 388 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 OR9K2Q8NGE7 335 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 OR56B2PQ8NGI1 322 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 ZPLD1Q8TCW7 415 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 VN1R17PQ8TDU5 208 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 PHF3Q92576 2039 aaKnown RBP3.31□□□□□ -1.88
MCF2-210ENST00000536274 BCL2L2Q92843 193 aaPredicted RBP3.31□□□□□ -1.88
MCF2-210ENST00000536274 SLC35E1Q96K37 410 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 SPATA33Q96N06 139 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 CIB3Q96Q77 187 aaPredicted RBP3.31□□□□□ -1.88
MCF2-210ENST00000536274 SLC25A21Q9BQT8 299 aaPredicted RBP3.31□□□□□ -1.88
MCF2-210ENST00000536274 ZNF2Q9BSG1 426 aaPredicted RBP3.31□□□□□ -1.88
MCF2-210ENST00000536274 ZBP1Q9H171 429 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 PCED1AQ9H1Q7 454 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 OR10A5Q9H207 317 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 OR52D1Q9H346 318 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 C1orf198Q9H425 327 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 WFDC1Q9HC57 220 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 SLC2A9Q9NRM0 540 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 NAGKQ9UJ70 344 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 KLK13Q9UKR3 277 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 PADI3Q9ULW8 664 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms