RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 SAP30LQ9HAJ7 183 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 UBAP1Q9NZ09 502 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 IL19Q9UHD0 177 aa10.23□□□□□ -0.77
CHD4-203ENST00000535717 ZNF469Q96JG9 3925 aaPredicted RBP10.22□□□□□ -0.77
CHD4-203ENST00000535717 ACANP16112 2415 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 IGHV4-30-2A0A087WSY4 118 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 LOC390937A0A1W2PQ73 354 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 TRIM64A6NGJ6 449 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 TRIM64BA6NI03 449 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 OR4C45A6NMZ5 311 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 ANKRD30BLA7E2S9 258 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 GMDSO60547 372 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 CDC14BO60729 498 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 RP2O75695 350 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 CST4P01036 141 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 ATP6V1B1P15313 513 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 CCL1P22362 96 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 CRHBPP24387 322 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 CRYBB2P43320 205 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 MAP2K3P46734 347 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 PDLIM4P50479 330 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 CCR9P51686 369 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 GBX2P52951 348 aaPredicted RBP10.22□□□□□ -0.77
CHD4-203ENST00000535717 DSCR9P59020 149 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 SLC35A2P78381 396 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 MRPS11P82912 194 aaKnown RBP10.22□□□□□ -0.77
CHD4-203ENST00000535717 MRPL28Q13084 256 aaKnown RBP10.22□□□□□ -0.77
CHD4-203ENST00000535717 HNRNPA0Q13151 305 aaKnown RBP10.22□□□□□ -0.77
CHD4-203ENST00000535717 MED21Q13503 144 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 ALKBH1Q13686 389 aaKnown RBP10.22□□□□□ -0.77
CHD4-203ENST00000535717 OR8G1Q15617 311 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 CARTPTQ16568 116 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 XAF1Q6GPH4 301 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 Q6ZSR3 168 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 TGIF2LYQ8IUE0 185 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 RDH10Q8IZV5 341 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 ZNF485Q8NCK3 441 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 SEMA6DQ8NFY4 1073 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 OR52N1Q8NH53 320 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 C10orf105Q8TEF2 133 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 ITLN1Q8WWA0 313 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 FAM168AQ92567 244 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 MYDGFQ969H8 173 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 MEGF10Q96KG7 1140 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 ADAT1Q9BUB4 502 aaKnown RBP10.22□□□□□ -0.77
CHD4-203ENST00000535717 PAPOLGQ9BWT3 736 aaKnown RBP10.22□□□□□ -0.77
CHD4-203ENST00000535717 MYOZ1Q9NP98 299 aaPredicted RBP10.22□□□□□ -0.77
CHD4-203ENST00000535717 ERVK-18Q9QC07 812 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 TPRKBQ9Y3C4 175 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 CACNG2Q9Y698 323 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 V9GYS6 101 aa10.22□□□□□ -0.77
CHD4-203ENST00000535717 IGHV1-69-2A0A0G2JMI3 117 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 IGHV3-64DA0A0J9YX35 117 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 A0A1B0GVI7 797 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 LOC107986453A0A1B0GWG9 222 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 H3BSH0 61 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 SYT7O43581 403 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 MTRF1O75570 445 aaKnown RBP10.21□□□□□ -0.77
CHD4-203ENST00000535717 DHRS3O75911 302 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 LALBAP00709 142 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 CSF3P09919 207 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 UBCP0CG48 685 aaKnown RBP10.21□□□□□ -0.77
CHD4-203ENST00000535717 FAHP16930 419 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 GIFP27352 417 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 RBMXP38159 391 aaKnown RBP10.21□□□□□ -0.77
CHD4-203ENST00000535717 TGM4P49221 684 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 RIPPLY1Q0D2K3 151 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 PRDX4Q13162 271 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 MAB21L1Q13394 359 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 DOC2BQ14184 412 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 RBM48Q5RL73 367 aaKnown RBP10.21□□□□□ -0.77
CHD4-203ENST00000535717 RNLSQ5VYX0 342 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 DOK3Q7L591 496 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 KRT74Q7RTS7 529 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 KLBQ86Z14 1044 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 FTMTQ8N4E7 242 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 NANOGP1Q8N7R0 232 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 OR14K1Q8NGZ2 314 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 GATAD2BQ8WXI9 593 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 CDCA4Q9BXL8 241 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 BABAM2Q9NXR7 383 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 TREM2Q9NZC2 230 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 PIGLQ9Y2B2 252 aa10.21□□□□□ -0.77
CHD4-203ENST00000535717 NOP16Q9Y3C1 178 aaKnown RBP10.21□□□□□ -0.77
CHD4-203ENST00000535717 SIRT4Q9Y6E7 314 aaPredicted RBP10.21□□□□□ -0.77
CHD4-203ENST00000535717 ZNF816-ZNF321PA0A0X1KG74 233 aa10.2□□□□□ -0.78
CHD4-203ENST00000535717 LOC100289279A0A1B0GTE1 492 aa10.2□□□□□ -0.78
CHD4-203ENST00000535717 ZNF850A8MQ14 1090 aa10.2□□□□□ -0.78
CHD4-203ENST00000535717 VWC2LB2RUY7 222 aa10.2□□□□□ -0.78
CHD4-203ENST00000535717 NDUFS8O00217 210 aa10.2□□□□□ -0.78
CHD4-203ENST00000535717 LMX1BO60663 402 aa10.2□□□□□ -0.78
CHD4-203ENST00000535717 ZFPL1O95159 310 aa10.2□□□□□ -0.78
CHD4-203ENST00000535717 MT-ND2P03891 347 aa10.2□□□□□ -0.78
CHD4-203ENST00000535717 ISG15P05161 165 aa10.2□□□□□ -0.78
CHD4-203ENST00000535717 TNFRSF1AP19438 455 aa10.2□□□□□ -0.78
CHD4-203ENST00000535717 ACHEP22303 614 aa10.2□□□□□ -0.78
CHD4-203ENST00000535717 GNALP38405 381 aa10.2□□□□□ -0.78
CHD4-203ENST00000535717 CD200P41217 278 aa10.2□□□□□ -0.78
CHD4-203ENST00000535717 SRP9P49458 86 aaKnown RBP10.2□□□□□ -0.78
CHD4-203ENST00000535717 RIN1Q13671 783 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms