RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	OR52I2	Q8NH67	350 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	GPX8	Q8TED1	209 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	FGF20	Q9NP95	211 aa	Predicted RBP	14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	NUP205	Q92621	2012 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	CD1E	P15812	388 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	NME2	P22392	152 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ACKR3	P25106	362 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SSX8	Q7RTT4	187 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	OR10AD1	Q8NGE0	317 aa		14.08	□□□□□ -0.16
NCAPD3-213	ENST00000534532	TRAF3IP2	O43734	574 aa	Predicted RBP	14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	HOXD11	P31277	338 aa	Predicted RBP	14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	MOB1B	Q7L9L4	216 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	EXTL1	Q92935	676 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	MOB3A	Q96BX8	217 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SAT2	Q96F10	170 aa	Predicted RBP	14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	BIN3	Q9NQY0	253 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SMCO4	Q9NRQ5	59 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	FOXJ3	Q9UPW0	622 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SIGLEC7	Q9Y286	467 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	TCRBV5S2	A0A599	114 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	hADV38S2	A0JD32	116 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	TMEM127	O75204	238 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	GLI4	P10075	376 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	PRRX1	P54821	245 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	STUM	Q69YW2	141 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	TRAT1	Q6PIZ9	186 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	NUDCD2	Q8WVJ2	157 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532		A0A1W2PQD3	144 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	AQP7P3	A6NL99	342 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ZFP92	A6NM28	416 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	NUDT19	A8MXV4	375 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	LRRC29	Q8WV35	223 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	RNF141	Q8WVD5	230 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	TMEM171	Q8WVE6	324 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	DUS3L	Q96G46	650 aa	Known RBP	14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	STRAP	Q9Y3F4	350 aa	Known RBP	14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	MASP2	O00187	686 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	FMOD	Q06828	376 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	TMEM268	Q5VZI3	342 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	DEGS2	Q6QHC5	323 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	DOK1	Q99704	481 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	PLA2G12A	Q9BZM1	189 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	GNG13	Q9P2W3	67 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	TRAPPC4	Q9Y296	219 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	DVL1	O14640	695 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	EPPIN	O95925	133 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	DTYMK	P23919	212 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	DVL1P1	P54792	670 aa	Predicted RBP	14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	IL20	Q9NYY1	176 aa		14.07	□□□□□ -0.16
NCAPD3-213	ENST00000534532	NGF	P01138	241 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	HNRNPF	P52597	415 aa	Known RBP	14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	PNLIPRP3	Q17RR3	467 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	NHLRC1	Q6VVB1	395 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	RIMKLA	Q8IXN7	391 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	CMBL	Q96DG6	245 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	RPS10-NUDT3	A0A1W2PQS6	291 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	FXYD1	O00168	92 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	RER1	O15258	196 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ANGPTL7	O43827	346 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	FLI1	Q01543	452 aa	Predicted RBP	14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SSX2	Q16385	188 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	OR13C5	Q8NGS8	318 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	FBXW5	Q969U6	566 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	C11orf54	Q9H0W9	315 aa	Predicted RBP	14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ZNF705F	A8MVS1	300 aa	Predicted RBP	14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	CT62	P0C5K7	136 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ZNF705D	P0CH99	300 aa	Predicted RBP	14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ZNF705B	P0CI00	300 aa	Predicted RBP	14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	OPCML	Q14982	345 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	POM121L2	Q96KW2	1035 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	TRAV38-1	A0A0B4J264	116 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	PRR35	P0CG20	571 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	RPS2	P15880	293 aa	Known RBP	14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ELL	P55199	621 aa	Predicted RBP	14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	PRDX4	Q13162	271 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	POU4F3	Q15319	338 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SH2D5	Q6ZV89	423 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	CXXC4	Q9H2H0	198 aa		14.06	□□□□□ -0.16
NCAPD3-213	ENST00000534532	TEX51	A0A1B0GUA7	166 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ZNF354A	O60765	605 aa	Predicted RBP	14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	DHRS3	O75911	302 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	HNF1A	P20823	631 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ZNF441	Q8N8Z8	693 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	KIAA1551	Q9HCM1	1747 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	C16orf97	H3BN30	126 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ADAM20	O43506	726 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	KDF1	Q8NAX2	398 aa	Predicted RBP	14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	LRRC3B	Q96PB8	259 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	PURG	Q9UJV8	347 aa	Known RBP	14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	OSGIN2	Q9Y236	505 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	MN1	Q10571	1320 aa	Predicted RBP	14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SP1	P08047	785 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	HOXD4	P09016	255 aa	Predicted RBP	14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	OR2G3	Q8NGZ4	309 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	OR6X1	Q8NH79	312 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SEC22C	Q9BRL7	303 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	STRCP1	A6NGW2	1772 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532		M0R1X1	148 aa		14.05	□□□□□ -0.16

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms