RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 UHRF2Q96PU4 802 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 ATAD5Q96QE3 1844 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 PRAMEF5Q5TYX0 476 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 PRAMEF6Q5VXH4 476 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 DMKNQ6E0U4 476 aaPredicted RBP15.7■□□□□ 0.1
PHRF1-205ENST00000533464 GLDNQ6ZMI3 551 aaPredicted RBP15.7■□□□□ 0.1
PHRF1-205ENST00000533464 ATG4DQ86TL0 474 aaPredicted RBP15.7■□□□□ 0.1
PHRF1-205ENST00000533464 ARV1Q9H2C2 271 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 FIGNL2A6NMB9 653 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 LINC01387J3KSC0 135 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 ZNF354AO60765 605 aaPredicted RBP15.7■□□□□ 0.1
PHRF1-205ENST00000533464 AVPR2P30518 371 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 KISS1Q15726 138 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 DRAM2Q6UX65 266 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 ARRDC1Q8N5I2 433 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 ZNF321PQ8N8H1 164 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 CMBLQ96DG6 245 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 MTFP1Q9UDX5 166 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 MRM2Q9UI43 246 aaKnown RBP15.7■□□□□ 0.1
PHRF1-205ENST00000533464 FBXO4Q9UKT5 387 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 SCN3AQ9NY46 2000 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 NDUFB6O95139 128 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 ELLP55199 621 aaPredicted RBP15.7■□□□□ 0.1
PHRF1-205ENST00000533464 FUT7Q11130 342 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 TMEM182Q6ZP80 229 aaPredicted RBP15.7■□□□□ 0.1
PHRF1-205ENST00000533464 SPSB1Q96BD6 273 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 C2orf50Q96LR7 162 aa15.7■□□□□ 0.1
PHRF1-205ENST00000533464 SSX4O60224 188 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 MT-CO3P00414 261 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 OR13C7P0DN81 318 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 ZNF718Q3SXZ3 478 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 TOR2AQ5JU69 321 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 GPA33Q99795 319 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 SLC17A5Q9NRA2 495 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 CES1P1Q9UKY3 287 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 TMEM272A0A1B0GTI8 110 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 H2AFB1P0C5Y9 115 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 ZFP36L2P47974 494 aaKnown RBP15.69■□□□□ 0.1
PHRF1-205ENST00000533464 SLC37A1P57057 533 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 RAB35Q15286 201 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 TMEM128Q5BJH2 165 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 KCNIP4Q6PIL6 250 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 BAP18Q8IXM2 172 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 GALNT16Q8N428 558 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 NUBPLQ8TB37 319 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 ZFP64Q9NPA5 681 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 MTCH2Q9Y6C9 303 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 TRGV5A0A0B4J1U4 118 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 ZNF705FA8MVS1 300 aaPredicted RBP15.69■□□□□ 0.1
PHRF1-205ENST00000533464 TOX3O15405 576 aaPredicted RBP15.69■□□□□ 0.1
PHRF1-205ENST00000533464 NME2P1O60361 137 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 IL5P05113 134 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 ZNF705DP0CH99 300 aaPredicted RBP15.69■□□□□ 0.1
PHRF1-205ENST00000533464 ZNF705BP0CI00 300 aaPredicted RBP15.69■□□□□ 0.1
PHRF1-205ENST00000533464 DBPQ10586 325 aaPredicted RBP15.69■□□□□ 0.1
PHRF1-205ENST00000533464 SPANXN5Q5MJ07 72 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 C1orf210Q8IVY1 113 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 NPEPL1Q8NDH3 523 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 SLC52A3Q9NQ40 469 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 C19orf12Q9NSK7 152 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 hCG_1809904A0A1W2PP81 198 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 A0A1W2PPE2 198 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 A0A1W2PR64 198 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 A0A1W2PRV1 198 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 D2HGDHQ8N465 521 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 UQCC2Q9BRT2 126 aa15.69■□□□□ 0.1
PHRF1-205ENST00000533464 GPM6AP51674 278 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 LGALS8O00214 317 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 SSSCA1O60232 199 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 CTAG2O75638 210 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 RAC1P63000 192 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 KIF13BQ9NQT8 1826 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 TRIOBPQ9H2D6 2365 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 H3BMH7 237 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 CT45A8P0DMV1 189 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 CT45A9P0DMV2 189 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 EIF3IQ13347 325 aaKnown RBP15.68■□□□□ 0.1
PHRF1-205ENST00000533464 CT45A2Q5DJT8 189 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 SSX9Q7RTT3 188 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 RBMXL3Q8N7X1 1067 aaKnown RBP15.68■□□□□ 0.1
PHRF1-205ENST00000533464 NANPQ8TBE9 248 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 DAZAP1Q96EP5 407 aaKnown RBP15.68■□□□□ 0.1
PHRF1-205ENST00000533464 RIMS4Q9H426 269 aaPredicted RBP15.68■□□□□ 0.1
PHRF1-205ENST00000533464 IGKV1-8A0A0C4DH67 115 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 M0R1B8 84 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 OR8U8P0C7N1 319 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 CD80P33681 288 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 PTPMT1Q8WUK0 201 aaPredicted RBP15.68■□□□□ 0.1
PHRF1-205ENST00000533464 OIT3Q8WWZ8 545 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 FBXW5Q969U6 566 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 ARHGAP5-AS1Q96IT6 56 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 RPH3ALQ9UNE2 315 aa15.68■□□□□ 0.1
PHRF1-205ENST00000533464 E5RGE8 158 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 IGHV4-34P06331 123 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 PDCD1Q15116 288 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 MESTQ5EB52 335 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 FAM74A1Q5RGS3 127 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 ZNF774Q6NX45 483 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 RASL10BQ96S79 203 aa15.67■□□□□ 0.1
PHRF1-205ENST00000533464 ZNF416Q9BWM5 594 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms