RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 HMX3A6NHT5 357 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 CCNKO75909 580 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 TRAPPC2P0DI81 140 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 TRAPPC2BP0DI82 140 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 HLA-DMAP28067 261 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 ARR3P36575 388 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 FAM3AP98173 230 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 PCGF3Q3KNV8 242 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 HIKESHIQ53FT3 197 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 TFAP2EQ6VUC0 442 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 FAM214BQ7L5A3 538 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 OR2W3Q7Z3T1 314 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 TMEM104Q8NE00 496 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 OR6F1Q8NGZ6 308 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 BCL2L2Q92843 193 aaPredicted RBP13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 SPSB4Q96A44 273 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 SEH1LQ96EE3 360 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 RNF170Q96K19 258 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 ZMAT3Q9HA38 289 aaKnown RBP13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 ELF5Q9UKW6 265 aaPredicted RBP13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 WASF3Q9UPY6 502 aa13.41□□□□□ -0.26
CCDC90B-213ENST00000529611 DMXL2Q8TDJ6 3036 aa13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 MEIS3P1A6NDR6 274 aa13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 NAP1L6A6NFF2 107 aa13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 SULT1C2O00338 296 aa13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 XRCC2O43543 280 aa13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 CCL2P13500 99 aa13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 STOMP27105 288 aa13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 GSK3AP49840 483 aa13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 OR8B8Q15620 311 aa13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 SFRP4Q6FHJ7 346 aaPredicted RBP13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 FAAP20Q6NZ36 180 aa13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 ZNF584Q8IVC4 421 aa13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 RBMXL3Q8N7X1 1067 aaKnown RBP13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 PNLDC1Q8NA58 520 aaKnown RBP13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 OR5D18Q8NGL1 313 aa13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 PIGTQ969N2 578 aa13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 CMBLQ96DG6 245 aa13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 GPR173Q9NS66 373 aa13.4□□□□□ -0.26
CCDC90B-213ENST00000529611 A0A1W2PP11 408 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 C5orf49A4QMS7 147 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 UBBP0CG47 229 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 SDHBP21912 280 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 CCNOP22674 350 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 PTGFRP43088 359 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 ALDH3B1P43353 468 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 EIF2B2P49770 351 aaKnown RBP13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 ZNF260Q3ZCT1 412 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 TMEM42Q69YG0 159 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 TMEM53Q6P2H8 277 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 BTN2A1Q7KYR7 527 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 C1QL2Q7Z5L3 287 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 C9orf106Q8NAJ2 232 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 KCNG3Q8TAE7 436 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 DEDD2Q8WXF8 326 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 AQP3Q92482 292 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 AKAP1Q92667 903 aaKnown RBP eCLIP13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 LPAR5Q9H1C0 372 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 TAS2R8Q9NYW2 309 aa13.4□□□□□ -0.27
CCDC90B-213ENST00000529611 TMEM235A6NFC5 223 aa13.39□□□□□ -0.27
CCDC90B-213ENST00000529611 CDC14BO60729 498 aa13.39□□□□□ -0.27
CCDC90B-213ENST00000529611 LPLP06858 475 aa13.39□□□□□ -0.27
CCDC90B-213ENST00000529611 CSF1P09603 554 aa13.39□□□□□ -0.27
CCDC90B-213ENST00000529611 NAT2P11245 290 aa13.39□□□□□ -0.27
CCDC90B-213ENST00000529611 VEGFCP49767 419 aa13.39□□□□□ -0.27
CCDC90B-213ENST00000529611 SSBP1Q04837 148 aaKnown RBP13.39□□□□□ -0.27
CCDC90B-213ENST00000529611 ACSF3Q4G176 576 aaPredicted RBP13.39□□□□□ -0.27
CCDC90B-213ENST00000529611 WNT2BQ93097 391 aa13.39□□□□□ -0.27
CCDC90B-213ENST00000529611 SPSB1Q96BD6 273 aa13.39□□□□□ -0.27
CCDC90B-213ENST00000529611 POM121L2Q96KW2 1035 aa13.39□□□□□ -0.27
CCDC90B-213ENST00000529611 NICN1Q9BSH3 213 aa13.39□□□□□ -0.27
CCDC90B-213ENST00000529611 SCPEP1Q9HB40 452 aa13.39□□□□□ -0.27
CCDC90B-213ENST00000529611 A0A0A6YYD4 124 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 SCGNO76038 276 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 MPIG6BO95866 241 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 TBRG1Q3YBR2 411 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 CLVS2Q5SYC1 327 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 Q6ZTK2 550 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 DPPA2Q7Z7J5 298 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 SPACA3Q8IXA5 215 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 ST6GAL2Q96JF0 529 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 TMEM59Q9BXS4 323 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 BANF2Q9H503 90 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 MCUBQ9NWR8 336 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 LHX6Q9UPM6 363 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 OR14I1A6ND48 311 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 DHFRP00374 187 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 PSMB1P20618 241 aaKnown RBP13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 KIR2DL2P43627 348 aaPredicted RBP13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 ACTBP60709 375 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 ACTG1P63261 375 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 PLP2Q04941 152 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 GSG1Q2KHT4 349 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 SLC22A6Q4U2R8 563 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 OR4C16Q8NGL9 310 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 OR10R2Q8NGX6 335 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 TNFAIP8L1Q8WVP5 186 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 NUDT16L1Q9BRJ7 211 aaKnown RBP13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 C20orf85Q9H1P6 137 aa13.38□□□□□ -0.27
CCDC90B-213ENST00000529611 DKK4Q9UBT3 224 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms