RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 CT45A6P0DMU7 189 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 CT45A5P0DMU8 189 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 CT45A7P0DMV0 189 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 PTHLHP12272 177 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 MMP15P51511 669 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 CT45A1Q5HYN5 189 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 AADACL3Q5VUY0 350 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 PRSS45Q7RTY3 260 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 WDR5BQ86VZ2 330 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 CADM4Q8NFZ8 388 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 OR4N2Q8NGD1 307 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 CT45A3Q8NHU0 189 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 OXGR1Q96P68 337 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 LRRC3BQ96PB8 259 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 SLC35B3Q9H1N7 401 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 GSX1Q9H4S2 264 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 NECAP2Q9NVZ3 263 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 ELF5Q9UKW6 265 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 PPP1R3CQ9UQK1 317 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 C5orf67F2Z3F1 127 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 M0R2Z0 102 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 SIAH2O43255 324 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 HRO43593 1189 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 ZNF728P0DKX0 622 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 CD99P14209 185 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 PTGER4P35408 488 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 PCBP3P57721 371 aaKnown RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 C9orf135Q5VTT2 229 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 RNLSQ5VYX0 342 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 GPR32P1Q8NGA4 272 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 KCNE4Q8WWG9 221 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 DVL3Q92997 716 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 ARSGQ96EG1 525 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 LRFN3Q9BTN0 628 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 SLIRPQ9GZT3 109 aaKnown RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 PLK3Q9H4B4 646 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 ISG20L2Q9H9L3 353 aaKnown RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 CALHM2Q9HA72 323 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 CCL27Q9Y4X3 112 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 A0A087WUJ7 227 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 DEDDO75618 318 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 PMP2P02689 132 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 QDPRP09417 244 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 ZGLP1P0C6A0 271 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 TCN2P20062 427 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 DRD3P35462 400 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 DGCR2P98153 550 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 AKR1C1Q04828 323 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 IKZF1Q13422 519 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 ETFDHQ16134 617 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 ATP6V1FQ16864 119 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 GLDNQ6ZMI3 551 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 ANGPTL5Q86XS5 388 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 RBMXL3Q8N7X1 1067 aaKnown RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 DMBX1Q8NFW5 382 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 OR51A2Q8NGJ7 313 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 OR6K3Q8NGY3 331 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 OR52I2Q8NH67 350 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 ATOH1Q92858 354 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 FAM122AQ96E09 287 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.51□□□□□ -1.375e-7■■■□□ 16.1
CTNND1-218ENST00000528232 ZNF275Q9NSD4 429 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 CGGBP1Q9UFW8 167 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 MRPS2Q9Y399 296 aaKnown RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 CSAG2Q9Y5P2 127 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 RALGAPA2Q2PPJ7 1873 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 TRIP12Q14669 1992 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 PLSCR5A0PG75 271 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 GPR31O00270 319 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 ST8SIA3O43173 380 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 OR7C1O76099 320 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 IGHA2P01877 340 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 IL2RGP31785 369 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 KIR2DL3P43628 341 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 ZNF90Q03938 601 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 OR5I1Q13606 314 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 IAH1Q2TAA2 248 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 SIRT6Q8N6T7 355 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 TMED6Q8WW62 240 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 ZNF775Q96BV0 537 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 FAM210BQ96KR6 192 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 GPR137Q96N19 417 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 LINC00052Q96N35 136 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 CACFD1Q9UGQ2 172 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 AK3Q9UIJ7 227 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 TMED3Q9Y3Q3 217 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 PCDHGA9Q9Y5G4 932 aaKnown RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 ZNF729A6NN14 1252 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 IFITM5A6NNB3 132 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 CBX7O95931 251 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 AADACP22760 399 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 RPL24P83731 157 aaKnown RBP6.51□□□□□ -1.37
CTNND1-218ENST00000528232 PRICKLE4Q2TBC4 344 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 FA2HQ7L5A8 372 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 SYT9Q86SS6 491 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 OR5M1Q8NGP8 315 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 MYOTQ9UBF9 498 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 GPR160Q9UJ42 338 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 B3GALT5Q9Y2C3 310 aa6.51□□□□□ -1.37
CTNND1-218ENST00000528232 ARL2-SNX15V9GYD0 113 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms