RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 USE1Q9NZ43 259 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 OR5V1Q9UGF6 321 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 OPN4Q9UHM6 478 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 COPS3Q9UNS2 423 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 RHBDD3Q9Y3P4 386 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 INSIG2Q9Y5U4 225 aa10.13□□□□□ -0.79
TRAPPC4-209ENST00000528230 LOC105371242A0A075B767 164 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 TRAV38-1A0A0B4J264 116 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 A6NLC8 198 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 ANXA2P2A6NMY6 339 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 ZNF670-ZNF695F2Z2N8 137 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 TNFRSF13BO14836 293 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 ALPLP05186 524 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 HTR1FP30939 366 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 PSMB10P40306 273 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 MAP2K3P46734 347 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 NPY4RP50391 375 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 CDC42P60953 191 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 CXCR4P61073 352 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 GNB2P62879 340 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 PAX8Q06710 450 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 EGR3Q06889 387 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 POU4F2Q12837 409 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 ZNF154Q13106 437 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 GFOD2Q3B7J2 385 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 ZNF829Q3KNS6 432 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 FAM76BQ5HYJ3 339 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 ZNF322Q6U7Q0 402 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 C11orf53Q8IXP5 236 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 SLC35F2Q8IXU6 374 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 DEFB108BQ8NET1 73 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 OR1M1Q8NGA1 313 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 DVL3Q92997 716 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 ITPKCQ96DU7 683 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 LYZL4Q96KX0 146 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 RAB3IPQ96QF0 476 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 MICU1Q9BPX6 476 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 PAPOLGQ9BWT3 736 aaKnown RBP10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 RIBC2Q9H4K1 309 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 ORC6Q9Y5N6 252 aa10.12□□□□□ -0.79
TRAPPC4-209ENST00000528230 ATRQ13535 2644 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 OOEPA6NGQ2 149 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 TMEM210A6NLX4 147 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 PRR32B1ATL7 298 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 M0R129 80 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 PSMD9O00233 223 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 FSHBP01225 129 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 IGLV3-1P01715 115 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 OR2T7P0C7T2 308 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 PPIAL4GP0DN37 164 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 EPHA1P21709 976 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 ACKR3P25106 362 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 PITPNBP48739 271 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 ALDH3A2P51648 485 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 PAX2Q02962 417 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 C11orf91Q3C1V1 193 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 KRTAP24-1Q3LI83 254 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 SLC25A30Q5SVS4 291 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 ZBTB37Q5TC79 503 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 TEX36Q5VZQ5 186 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 LYPD2Q6UXB3 125 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 ZNF826PQ6ZT77 177 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 USP43Q70EL4 1123 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 GCSAMQ8N6F7 178 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 OR2T27Q8NH04 317 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 ZNF418Q8TF45 676 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 RAB40AQ8WXH6 277 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 OR5P3Q8WZ94 311 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 RFKQ969G6 155 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 HRASLS5Q96KN8 279 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 MRI1Q9BV20 369 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 RTL8AQ9BWD3 113 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 PBOV1Q9GZY1 135 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 TLNRD1Q9H1K6 362 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 MOB1AQ9H8S9 216 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 CLN8Q9UBY8 286 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 NUFIP1Q9UHK0 495 aaKnown RBP10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 IKZF2Q9UKS7 526 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 AUP1Q9Y679 476 aa10.11□□□□□ -0.79
TRAPPC4-209ENST00000528230 FBN1P35555 2871 aaKnown RBP10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 MXRA5Q9NR99 2828 aa10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 ZNF816-ZNF321PA0A0X1KG74 233 aa10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 KIR2DS1A0A191URI9 304 aa10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 hCG_1807616A0A1W2PRN6 198 aa10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 ZNF850A8MQ14 1090 aa10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 E9PQ18 207 aa10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 EI24O14681 340 aa10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 SRSF10O75494 262 aaKnown RBP10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 MTRF1O75570 445 aaKnown RBP10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 MUC1P15941 1255 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 ADRA2CP18825 462 aa10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 RIPPLY1Q0D2K3 151 aa10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 PRDX4Q13162 271 aa10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 WDR25Q64LD2 544 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 SFRP4Q6FHJ7 346 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 BTNL3Q6UXE8 466 aa10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 WDR82Q6UXN9 313 aa10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 ZNF841Q6ZN19 808 aa10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 WDR86Q86TI4 376 aa10.1□□□□□ -0.79
TRAPPC4-209ENST00000528230 PHC2Q8IXK0 858 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms