RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 PGAM5Q96HS1 289 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 PLEKHA8Q96JA3 519 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 Q96M85 177 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 ZFP3Q96NJ6 502 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 RBP7Q96R05 134 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 GPX7Q96SL4 187 aaPredicted RBP3.86□□□□□ -1.79
USP48-211ENST00000526044 MBOAT4Q96T53 435 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 APOL4Q9BPW4 351 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 TTYH2Q9BSA4 534 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 PCGF1Q9BSM1 259 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 EMC6Q9BV81 110 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 KATNB1Q9BVA0 655 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 PRRG3Q9BZD7 231 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 PLA2G12AQ9BZM1 189 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 WNT5BQ9H1J7 359 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 SLC25A19Q9HC21 320 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 NGBQ9NPG2 151 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 MED29Q9NX70 200 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 EMC3Q9P0I2 261 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 B3GAT1Q9P2W7 334 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 CLCF1Q9UBD9 225 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 ZNF629Q9UEG4 869 aaPredicted RBP3.86□□□□□ -1.79
USP48-211ENST00000526044 KLHL21Q9UJP4 597 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 CLEC4AQ9UMR7 237 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 AMDHD2Q9Y303 409 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 MEMO1Q9Y316 297 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 STRAPQ9Y3F4 350 aaKnown RBP3.86□□□□□ -1.79
USP48-211ENST00000526044 GMPPBQ9Y5P6 360 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 FLVCR1Q9Y5Y0 555 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 MED12LQ86YW9 2145 aa3.86□□□□□ -1.79
USP48-211ENST00000526044 NCOR2Q9Y618 2525 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 SHANK1Q9Y566 2161 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 XKRY2A2RUG3 117 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 C5orf51A6NDU8 294 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 OR6C65A6NJZ3 312 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 RIIAD1A6NNX1 92 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 CYSRT1A8MQ03 144 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 CENPBD1B2RD01 187 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 M0R3G1 203 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 BMPR1BO00238 502 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 SLC33A1O00400 549 aaPredicted RBP3.85□□□□□ -1.79
USP48-211ENST00000526044 SURF4O15260 269 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 SPINT2O43291 252 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 LRRTM2O43300 516 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 TRAF3IP2O43734 574 aaPredicted RBP3.85□□□□□ -1.79
USP48-211ENST00000526044 TLX2O43763 284 aaPredicted RBP3.85□□□□□ -1.79
USP48-211ENST00000526044 MPZL2O60487 215 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 SS18L1O75177 396 aaPredicted RBP3.85□□□□□ -1.79
USP48-211ENST00000526044 TRMUO75648 421 aaKnown RBP3.85□□□□□ -1.79
USP48-211ENST00000526044 SLC2A10O95528 541 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 TXNDC12O95881 172 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 IGHG1P01857 330 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 IGHMP01871 453 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 HIST1H1CP16403 213 aaKnown RBP3.85□□□□□ -1.79
USP48-211ENST00000526044 ZNF3P17036 446 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 PAICSP22234 425 aaKnown RBP3.85□□□□□ -1.79
USP48-211ENST00000526044 AGTR1P30556 359 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 OPRM1P35372 400 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 GGT2P36268 569 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 CAPGP40121 348 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 OR3A2P47893 321 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 FUT6P51993 359 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 AQP4P55087 323 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 SIRPAP78324 504 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 IL5RAQ01344 420 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 RELQ04864 619 aaPredicted RBP3.85□□□□□ -1.79
USP48-211ENST00000526044 IL18R1Q13478 541 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 MELKQ14680 651 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 THEM4Q5T1C6 240 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 C6orf52Q5T4I8 152 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 RIPPLY2Q5TAB7 128 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 SLX4IPQ5VYV7 408 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 CARD17Q5XLA6 110 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 C12orf73Q69YU5 71 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 LEG1Q6P5S2 330 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 IZUMO2Q6UXV1 221 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 FAM122BQ7Z309 247 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 NUFIP2Q7Z417 695 aaKnown RBP3.85□□□□□ -1.79
USP48-211ENST00000526044 ODF3L1Q8IXM7 274 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 C20orf196Q8IYI0 205 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 C1orf87Q8N0U7 546 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 GCNT2Q8N0V5 402 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 UBE2J2Q8N2K1 259 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 GPR137CQ8N3F9 429 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 RPRMLQ8N4K4 120 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 TCEANCQ8N8B7 351 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 CNEP1R1Q8N9A8 125 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 SYT14Q8NB59 555 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 UXS1Q8NBZ7 420 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 NPEPL1Q8NDH3 523 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 OR8J1Q8NGP2 316 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 OR6K3Q8NGY3 331 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 OR6N1Q8NGY5 312 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 FNDC8Q8TC99 324 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 THRSPQ92748 146 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 TMEM45BQ96B21 275 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 APH1AQ96BI3 265 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 RASD2Q96D21 266 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 RRNAD1Q96FB5 475 aaKnown RBP3.85□□□□□ -1.79
USP48-211ENST00000526044 ELMOD3Q96FG2 381 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms