RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 PRR23D2P0DMB1 279 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-215ENST00000519474 MDH2P40926 338 aaKnown RBP7.83□□□□□ -1.16
HDAC3-215ENST00000519474 CD200P41217 278 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 MMP16P51512 607 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 HCCSP53701 268 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 CRISP1P54107 249 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 RAD23AP54725 363 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 EFNB1P98172 346 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 FAM76BQ5HYJ3 339 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 DCAF12L2Q5VW00 463 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 SHQ1Q6PI26 577 aaKnown RBP7.83□□□□□ -1.16
HDAC3-215ENST00000519474 LYPD2Q6UXB3 125 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 KRT74Q7RTS7 529 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 MRPL21Q7Z2W9 205 aaKnown RBP7.83□□□□□ -1.16
HDAC3-215ENST00000519474 MOGAT3Q86VF5 341 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 ERI1Q8IV48 349 aaKnown RBP7.83□□□□□ -1.16
HDAC3-215ENST00000519474 KLHL36Q8N4N3 616 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 OR6N2Q8NGY6 317 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 THEM6Q8WUY1 208 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 RNF133Q8WVZ7 376 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 SPRYD4Q8WW59 207 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-215ENST00000519474 ERGIC1Q969X5 290 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 SPSB4Q96A44 273 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 OTULINQ96BN8 352 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 ZMYND19Q96E35 227 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-215ENST00000519474 INTS14Q96SY0 518 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 TEAD3Q99594 435 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 TMEM246Q9BRR3 403 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 COPS4Q9BT78 406 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 C6orf62Q9GZU0 229 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-215ENST00000519474 OCEL1Q9H607 264 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 ZNF556Q9HAH1 456 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 PPIAL4AQ9Y536 164 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 SESN1Q9Y6P5 492 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 A0A0G2JMP0 313 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 A0A0X1KG70 313 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 CEACAM18A8MTB9 384 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 ZNF878C9JN71 531 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 TCF21O43680 179 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 CIDEAO60543 219 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 GMDSO60547 372 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 SELENOFO60613 162 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 FAM20BO75063 409 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 ATP5HO75947 161 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 SNAPINO95295 136 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 ADRA2CP18825 462 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 SLC2A5P22732 501 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 GATA3P23771 443 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 CPT2P23786 658 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 DDOSTP39656 456 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 OPRL1P41146 370 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 SLC15A1P46059 708 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 GRB2P62993 217 aaKnown RBP7.82□□□□□ -1.16
HDAC3-215ENST00000519474 FAM3AP98173 230 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 HOXA4Q00056 320 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-215ENST00000519474 PAX2Q02962 417 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 PAX8Q06710 450 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 PTGES3Q15185 160 aaKnown RBP7.82□□□□□ -1.16
HDAC3-215ENST00000519474 OR8G1Q15617 311 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 KLHL12Q53G59 568 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 PRAMEF6Q5VXH4 476 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 FAHD1Q6P587 224 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 IDO2Q6ZQW0 420 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 C1QL2Q7Z5L3 287 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 AMIGO2Q86SJ2 522 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 C11orf53Q8IXP5 236 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 SPICQ8N5J4 248 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 PLPP7Q8NBV4 271 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 DEFB108BQ8NET1 73 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 BBS1Q8NFJ9 593 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 OR4M2Q8NGB6 313 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 OR5K1Q8NHB7 308 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 OTOSQ8NHW6 89 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 NANPQ8TBE9 248 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 Q8TCH9 128 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 FAM216AQ8WUB2 273 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 DUS3LQ96G46 650 aaKnown RBP7.82□□□□□ -1.16
HDAC3-215ENST00000519474 C19orf24Q9BVV8 132 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 SLC22A4Q9H015 551 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 TOR3AQ9H497 397 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 PPP1R3EQ9H7J1 279 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 SLC25A19Q9HC21 320 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 UFSP2Q9NUQ7 469 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 TVP23BQ9NYZ1 205 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 MIOXQ9UGB7 285 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 INSIG2Q9Y5U4 225 aa7.82□□□□□ -1.16
HDAC3-215ENST00000519474 A0A0A6YYJ9 748 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 DPPA5A6NC42 116 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 DBX1A6NMT0 343 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 A8MXK9 166 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 MAGEB3O15480 346 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 TXNL1O43396 289 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 XRCC2O43543 280 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 MITFO75030 526 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-215ENST00000519474 FSHBP01225 129 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 LHBP01229 141 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 ZNF12P17014 697 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 ALOX5APP20292 161 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 PAICSP22234 425 aaKnown RBP7.81□□□□□ -1.16
HDAC3-215ENST00000519474 EPHA2P29317 976 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms