RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 MAPK14Q16539 360 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 DECR1Q16698 335 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 BSXQ3C1V8 233 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 TRMT12Q53H54 448 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 EIF5AL1Q6IS14 154 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 TMPPEQ6ZT21 453 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 MTSS1LQ765P7 747 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 RTN4RL2Q86UN3 420 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 TMEFF1Q8IYR6 380 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 CSNK2A3Q8NEV1 391 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 RAB1CQ92928 201 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 DVL3Q92997 716 aaPredicted RBP6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 TPSD1Q9BZJ3 242 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 SLC25A31Q9H0C2 315 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 HRH4Q9H3N8 390 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 THADAQ6YHU6 1953 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 TRBV7-9A0A0J9YWB2 115 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 TMEM129A0AVI4 362 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 FAM183AA6NL82 134 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 SHISA7A6NL88 538 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 HIST1H2BKO60814 126 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 MT-ATP6P00846 226 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 LCATP04180 440 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 HIST1H2BJP06899 126 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 HIST1H2BOP23527 126 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 HIST1H2BBP33778 126 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 HIST1H2BDP58876 126 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 HIST1H2BCP62807 126 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 HIST2H2BEQ16778 126 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 IDNKQ5T6J7 187 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 STEAP1BQ6NZ63 245 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 Q6ZTK2 550 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 SLC35D2Q76EJ3 337 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 ATG4DQ86TL0 474 aaPredicted RBP6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 CD163Q86VB7 1156 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 OR4F15Q8NGB8 312 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 ADAMTS15Q8TE58 950 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 C11orf40Q8WZ69 217 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 FAM3CQ92520 227 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 HIST1H2BHQ93079 126 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 CTHRC1Q96CG8 243 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 HIST1H2BNQ99877 126 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 HIST1H2BMQ99879 126 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 ZNF350Q9GZX5 532 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 LMAN1LQ9HAT1 526 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 CA10Q9NS85 328 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 HSPB7Q9UBY9 170 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 STEAP1Q9UHE8 339 aa6.67□□□□□ -1.34
PDLIM5-219ENST00000514743 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 A0A1W2PPV4 95 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 KANTRA0A1W2PQU2 76 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 ZNF860A6NHJ4 632 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 HCRTR1O43613 425 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 GLSO94925 669 aaPredicted RBP6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 UMODP07911 640 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 ZGLP1P0C6A0 271 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 CPMP14384 443 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 ANOS1P23352 680 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 FPR2P25090 351 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 NRG3P56975 720 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 MGAT2Q10469 447 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 FIGLAQ6QHK4 219 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 ZNF730Q6ZMV8 503 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 MBOAT2Q6ZWT7 520 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 MRPL41Q8IXM3 137 aaKnown RBP6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 PNLDC1Q8NA58 520 aaKnown RBP6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 OR4K14Q8NGD5 310 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 PIGXQ8TBF5 258 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 HPSE2Q8WWQ2 592 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 SDF2Q99470 211 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 MCHR1Q99705 422 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 ZNF471Q9BX82 626 aaPredicted RBP6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 SLC5A7Q9GZV3 580 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 TCEAL2Q9H3H9 227 aaPredicted RBP6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 TBC1D17Q9HA65 648 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 PITPNC1Q9UKF7 332 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 EML5Q05BV3 1969 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 TRBV2A0A0J9YWF9 115 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 ANKRD61A6NGH8 418 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 CD8B2A6NJW9 211 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 GJE1A6NN92 205 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 J3QRE1 110 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 TNFRSF10CO14798 259 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 EEF1E1O43324 174 aaKnown RBP6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 FGF17O60258 216 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 LDB3O75112 727 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 SLC2A10O95528 541 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 GCGP01275 180 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 ATP1B1P05026 303 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 CELA2BP08218 269 aaPredicted RBP6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 PVRP15151 417 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 TNFSF4P23510 183 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 MTNR1AP48039 350 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 CKS1BP61024 79 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 PPP1CAP62136 330 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 C1DQ13901 141 aaKnown RBP6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 GLT8D1Q68CQ7 371 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 THSD4Q6ZMP0 1018 aa6.66□□□□□ -1.34
PDLIM5-219ENST00000514743 RNF44Q7L0R7 432 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms