RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 ZNF705GA8MUZ8 300 aaPredicted RBP4.62□□□□□ -1.67
NUP54-215ENST00000514313 E7EWF7 191 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 K7ERQ8 282 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 TNFRSF11BO00300 401 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 SNAI2O43623 268 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 APCSP02743 223 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 OR56A5P0C7T3 313 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 GOLGA8HP0CJ92 632 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 SIGLEC14Q08ET2 396 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 PNOCQ13519 176 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 GPR176Q14439 515 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 TMEM236Q5W0B7 351 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 KDM4DQ6B0I6 523 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 EPGNQ6UW88 154 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 LINC00469Q8N7U9 141 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 OR10Z1Q8NGY1 313 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 GHSRQ92847 366 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 CDS1Q92903 461 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 TSNAXQ99598 290 aaKnown RBP4.62□□□□□ -1.67
NUP54-215ENST00000514313 SYT4Q9H2B2 425 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 ZNF355PQ9NSJ1 428 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 TMEM100Q9NV29 134 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 VAX2Q9UIW0 290 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 CFAP45Q9UL16 551 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 SIGLEC7Q9Y286 467 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 JCADQ9P266 1359 aa4.62□□□□□ -1.67
NUP54-215ENST00000514313 ANKRD20A5PA0PJZ0 165 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 C5orf63A6NC05 138 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 RSPH10B2B2RC85 870 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 BPY2O14599 106 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 YKT6O15498 198 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 UPK1BO75841 260 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 GLSO94925 669 aaPredicted RBP4.61□□□□□ -1.67
NUP54-215ENST00000514313 TRBV12-3P01733 135 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 RSPH10BP0C881 870 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 CD9P21926 228 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 ARR3P36575 388 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 GALR1P47211 349 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 PPIDQ08752 370 aaKnown RBP4.61□□□□□ -1.67
NUP54-215ENST00000514313 DYNC1I2Q13409 638 aaKnown RBP4.61□□□□□ -1.67
NUP54-215ENST00000514313 TIFABQ6ZNK6 161 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 ZNF645Q8N7E2 425 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 OR1J4Q8NGS1 313 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 LILRB4Q8NHJ6 448 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 RBMXL1Q96E39 390 aaKnown RBP4.61□□□□□ -1.67
NUP54-215ENST00000514313 ZNF285Q96NJ3 590 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 RBBP8Q99708 897 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 C20orf144Q9BQM9 153 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 VCX3AQ9NNX9 186 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 NDRG2Q9UN36 371 aaKnown RBP4.61□□□□□ -1.67
NUP54-215ENST00000514313 TMEM14AQ9Y6G1 99 aa4.61□□□□□ -1.67
NUP54-215ENST00000514313 IGLV3-16A0A075B6K0 115 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 IGKV6D-21A0A0A0MT36 114 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 IGHV2OR16-5A0A0B4J2B6 119 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 H0YJW9 148 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 H7C2Y5 167 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 TAAR5O14804 337 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 ZNF207O43670 478 aaKnown RBP4.6□□□□□ -1.67
NUP54-215ENST00000514313 NPPAP01160 153 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 CXCR1P25024 350 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 TAS2R31P59538 309 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 IFITM3Q01628 133 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 MAD2L1BPQ15013 274 aaPredicted RBP4.6□□□□□ -1.67
NUP54-215ENST00000514313 TNXAQ16473 311 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 C6orf99Q4VX62 202 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 LGALS14Q8TCE9 139 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 ING5Q8WYH8 240 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 CDKL2Q92772 493 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 NARS2Q96I59 477 aaKnown RBP4.6□□□□□ -1.67
NUP54-215ENST00000514313 CPB2Q96IY4 423 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 NAPGQ99747 312 aaPredicted RBP4.6□□□□□ -1.67
NUP54-215ENST00000514313 KCNS3Q9BQ31 491 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 SULT4A1Q9BR01 284 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 FRMD8P1Q9BZ68 369 aaPredicted RBP4.6□□□□□ -1.67
NUP54-215ENST00000514313 VCXQ9H320 206 aa4.6□□□□□ -1.67
NUP54-215ENST00000514313 MGAT4DA6NG13 374 aa4.59□□□□□ -1.67
NUP54-215ENST00000514313 CHST10O43529 356 aa4.59□□□□□ -1.67
NUP54-215ENST00000514313 CTDNEP1O95476 244 aa4.59□□□□□ -1.67
NUP54-215ENST00000514313 SLC35G6P0C7Q6 338 aa4.59□□□□□ -1.67
NUP54-215ENST00000514313 ZNF806P0C7X5 589 aa4.59□□□□□ -1.67
NUP54-215ENST00000514313 C2orf54Q08AI8 447 aa4.59□□□□□ -1.67
NUP54-215ENST00000514313 INCA1Q0VD86 236 aa4.59□□□□□ -1.67
NUP54-215ENST00000514313 PTGES3Q15185 160 aaKnown RBP4.59□□□□□ -1.67
NUP54-215ENST00000514313 FAM27D1Q5T7N8 215 aa4.59□□□□□ -1.67
NUP54-215ENST00000514313 Q5W150 140 aa4.59□□□□□ -1.67
NUP54-215ENST00000514313 OPN5Q6U736 354 aa4.59□□□□□ -1.67
NUP54-215ENST00000514313 LGI3Q8N145 548 aa4.59□□□□□ -1.67
NUP54-215ENST00000514313 EMC6Q9BV81 110 aa4.59□□□□□ -1.67
NUP54-215ENST00000514313 ZNF430Q9H8G1 570 aaPredicted RBP4.59□□□□□ -1.67
NUP54-215ENST00000514313 COL16A1Q07092 1604 aaPredicted RBP4.58□□□□□ -1.68
NUP54-215ENST00000514313 IGSF9BQ9UPX0 1349 aa4.58□□□□□ -1.68
NUP54-215ENST00000514313 TRAV8-4A0A0B4J246 113 aa4.58□□□□□ -1.68
NUP54-215ENST00000514313 P01737 135 aa4.58□□□□□ -1.68
NUP54-215ENST00000514313 ADRA2AP08913 450 aa4.58□□□□□ -1.68
NUP54-215ENST00000514313 LIPCP11150 499 aa4.58□□□□□ -1.68
NUP54-215ENST00000514313 SAXO1Q8IYX7 474 aa4.58□□□□□ -1.68
NUP54-215ENST00000514313 SYNPRQ8TBG9 265 aa4.58□□□□□ -1.68
NUP54-215ENST00000514313 TMEM159Q96B96 161 aa4.58□□□□□ -1.68
NUP54-215ENST00000514313 OR4K3Q96R72 315 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms