RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 TEX36Q5VZQ5 186 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 RBMS3Q6XE24 437 aaKnown RBP14.89□□□□□ -0.03
TPM3-220ENST00000509601 FAM90A1Q86YD7 464 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 PARP8Q8N3A8 854 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 OR8S1Q8NH09 359 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 OR5K1Q8NHB7 308 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 RGCCQ9H4X1 137 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 SMURF1Q9HCE7 757 aa14.89□□□□□ -0.03
TPM3-220ENST00000509601 PAPOLBQ9NRJ5 636 aaKnown RBP14.89□□□□□ -0.03
TPM3-220ENST00000509601 IGHV3OR15-7A0A075B7D8 119 aa14.88□□□□□ -0.03
TPM3-220ENST00000509601 PRTN3P24158 256 aa14.88□□□□□ -0.03
TPM3-220ENST00000509601 FGF12P61328 243 aa14.88□□□□□ -0.03
TPM3-220ENST00000509601 RPS7P62081 194 aaKnown RBP14.88□□□□□ -0.03
TPM3-220ENST00000509601 ELF3P78545 371 aaPredicted RBP14.88□□□□□ -0.03
TPM3-220ENST00000509601 EFNB1P98172 346 aa14.88□□□□□ -0.03
TPM3-220ENST00000509601 WDR82Q6UXN9 313 aa14.88□□□□□ -0.03
TPM3-220ENST00000509601 GALNT4Q8N4A0 578 aa14.88□□□□□ -0.03
TPM3-220ENST00000509601 CSNK2A3Q8NEV1 391 aa14.88□□□□□ -0.03
TPM3-220ENST00000509601 DNAJC9Q8WXX5 260 aa14.88□□□□□ -0.03
TPM3-220ENST00000509601 ITPKCQ96DU7 683 aa14.88□□□□□ -0.03
TPM3-220ENST00000509601 DUX5Q96PT3 197 aa14.88□□□□□ -0.03
TPM3-220ENST00000509601 YIPF3Q9GZM5 350 aa14.88□□□□□ -0.03
TPM3-220ENST00000509601 FGF23Q9GZV9 251 aaPredicted RBP14.88□□□□□ -0.03
TPM3-220ENST00000509601 MS4A7Q9GZW8 240 aaPredicted RBP14.88□□□□□ -0.03
TPM3-220ENST00000509601 TLNRD1Q9H1K6 362 aa14.88□□□□□ -0.03
TPM3-220ENST00000509601 MMADHCQ9H3L0 296 aaPredicted RBP14.88□□□□□ -0.03
TPM3-220ENST00000509601 TRIM36Q9NQ86 728 aa14.88□□□□□ -0.03
TPM3-220ENST00000509601 KAAG1Q9UBP8 84 aa14.88□□□□□ -0.03
TPM3-220ENST00000509601 hCG_1807616A0A1W2PRN6 198 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 PRR32B1ATL7 298 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.87□□□□□ -0.03
TPM3-220ENST00000509601 CDIPTO14735 213 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 PRKYO43930 277 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 MITFO75030 526 aaPredicted RBP14.87□□□□□ -0.03
TPM3-220ENST00000509601 CST4P01036 141 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 EPHA2P29317 976 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 CFHR2P36980 270 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 CSNK2BP67870 215 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 BAMBIQ13145 260 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 FAM76BQ5HYJ3 339 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 CD276Q5ZPR3 534 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 KRT74Q7RTS7 529 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 OR8B12Q8NGG6 310 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 LRRC29Q8WV35 223 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 SEH1LQ96EE3 360 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 TEX12Q9BXU0 123 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 NIPAL2Q9H841 368 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 LAMP5Q9UJQ1 280 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 LRP12Q9Y561 859 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 MPC1Q9Y5U8 109 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 TRRAPQ9Y4A5 3859 aa14.87□□□□□ -0.03
TPM3-220ENST00000509601 DNAJC9-AS1A6NH13 148 aa14.86□□□□□ -0.03
TPM3-220ENST00000509601 ZNF850A8MQ14 1090 aa14.86□□□□□ -0.03
TPM3-220ENST00000509601 PSMD9O00233 223 aa14.86□□□□□ -0.03
TPM3-220ENST00000509601 ENSAO43768 121 aaKnown RBP14.86□□□□□ -0.03
TPM3-220ENST00000509601 MMP9P14780 707 aa14.86□□□□□ -0.03
TPM3-220ENST00000509601 AMY2BP19961 511 aa14.86□□□□□ -0.03
TPM3-220ENST00000509601 PSMA6P60900 246 aaKnown RBP14.86□□□□□ -0.03
TPM3-220ENST00000509601 ESRRGP62508 458 aa14.86□□□□□ -0.03
TPM3-220ENST00000509601 ATP6AP1Q15904 470 aa14.86□□□□□ -0.03
TPM3-220ENST00000509601 DEGS2Q6QHC5 323 aa14.86□□□□□ -0.03
TPM3-220ENST00000509601 BCDIN3DQ7Z5W3 292 aaKnown RBP14.86□□□□□ -0.03
TPM3-220ENST00000509601 KRT77Q7Z794 578 aa14.86□□□□□ -0.03
TPM3-220ENST00000509601 OR5P3Q8WZ94 311 aa14.86□□□□□ -0.03
TPM3-220ENST00000509601 PPP1R14AQ96A00 147 aa14.86□□□□□ -0.03
TPM3-220ENST00000509601 DUS3LQ96G46 650 aaKnown RBP14.86□□□□□ -0.03
TPM3-220ENST00000509601 TECTBQ96PL2 329 aa14.86□□□□□ -0.03
TPM3-220ENST00000509601 PAPOLGQ9BWT3 736 aaKnown RBP14.86□□□□□ -0.03
TPM3-220ENST00000509601 PRDM13Q9H4Q3 707 aa14.86□□□□□ -0.03
TPM3-220ENST00000509601 COPS3Q9UNS2 423 aa14.86□□□□□ -0.03
TPM3-220ENST00000509601 TRAV40A0A0B4J280 105 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 A0A1B0GW55 424 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 ZNF879B4DU55 563 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 DVL1O14640 695 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 LIPFP07098 398 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 MRPL3P09001 348 aaKnown RBP14.85□□□□□ -0.03
TPM3-220ENST00000509601 DUX4L2P0CJ85 424 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 DUX4L3P0CJ86 424 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 DUX4L4P0CJ87 422 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 DUX4L5P0CJ88 424 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 DUX4L6P0CJ89 424 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 DUX4L7P0CJ90 424 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 HKR1P10072 659 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 MUC1P15941 1255 aaPredicted RBP14.85□□□□□ -0.03
TPM3-220ENST00000509601 GNALP38405 381 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 PRDX4Q13162 271 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 SLC9A3R2Q15599 337 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 AWAT1Q58HT5 328 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 DUX4L9Q6RFH8 374 aaPredicted RBP14.85□□□□□ -0.03
TPM3-220ENST00000509601 BTN2A1Q7KYR7 527 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 FGFRL1Q8N441 504 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 PIGCQ92535 297 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 TBX15Q96SF7 602 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 CCL13Q99616 98 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 MICU1Q9BPX6 476 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 FAM206AQ9NX38 181 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 KIF17Q9P2E2 1029 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 DUX4Q9UBX2 424 aa14.85□□□□□ -0.03
TPM3-220ENST00000509601 ACOD1A6NK06 481 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 SRRM5B3KS81 715 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms