RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 A0A0X1KG70 313 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 IGLV3-1P01715 115 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 GATA3P23771 443 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 RIDAP52758 137 aaKnown RBP13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 CXCR4P61073 352 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 FAM76BQ5HYJ3 339 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 ZNF684Q5T5D7 378 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 DCAF12L2Q5VW00 463 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 LYPD2Q6UXB3 125 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 C19orf18Q8NEA5 215 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 OR1M1Q8NGA1 313 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 OR4M2Q8NGB6 313 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 OR51G2Q8NGK0 314 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 ITPKCQ96DU7 683 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 C7orf69Q9H7B7 122 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 C1orf123Q9NWV4 160 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 MRM2Q9UI43 246 aaKnown RBP13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 METRNQ9UJH8 293 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 MPC1Q9Y5U8 109 aa13.49□□□□□ -0.25
PDLIM5-212ENST00000509333 ZNF850A8MQ14 1090 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 A8MXK9 166 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 PHYHO14832 338 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 PHF1O43189 567 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 OR2T7P0C7T2 308 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 PSMB10P40306 273 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 CDC42P60953 191 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 SNRPGP62308 76 aaKnown RBP13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 PAX2Q02962 417 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 EGR3Q06889 387 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 SNCBQ16143 134 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 SFRP4Q6FHJ7 346 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 ZNF841Q6ZN19 808 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 PQLC1Q8N2U9 271 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 OR2T27Q8NH04 317 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 OR8S1Q8NH09 359 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 OR5P3Q8WZ94 311 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 PIGCQ92535 297 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 TTTY10Q9BZA0 68 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 METTL17Q9H7H0 456 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 RNPEPL1Q9HAU8 725 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 IKZF2Q9UKS7 526 aa13.48□□□□□ -0.25
PDLIM5-212ENST00000509333 LOC105371242A0A075B767 164 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 A0A1W2PQL4 384 aaPredicted RBP13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 ZNF670-ZNF695F2Z2N8 137 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 LGALS8O00214 317 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 ENTPD6O75354 484 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 ATP6V1B1P15313 513 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 ZNF12P17014 697 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 CFHR2P36980 270 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 MAP2K3P46734 347 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 PAX8Q06710 450 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 OCLNQ16625 522 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 ESCO2Q56NI9 601 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 DCDC5Q6ZRR9 648 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 ZBTB49Q6ZSB9 765 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 SSX6Q7RTT6 188 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 ELMOD2Q8IZ81 293 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 GCSAMQ8N6F7 178 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 BOLLQ8N9W6 283 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 OR51E1Q8TCB6 317 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 RFKQ969G6 155 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 NEIL1Q96FI4 390 aaPredicted RBP13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 MICU1Q9BPX6 476 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 C9orf16Q9BUW7 83 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 FGF23Q9GZV9 251 aaPredicted RBP13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 TLNRD1Q9H1K6 362 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 GPR84Q9NQS5 396 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 NUFIP1Q9UHK0 495 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 ORC6Q9Y5N6 252 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 INSIG2Q9Y5U4 225 aa13.47□□□□□ -0.25
PDLIM5-212ENST00000509333 A0A1B0GTI1 187 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 APOL3O95236 402 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 TTRP02766 147 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 RPS2P15880 293 aaKnown RBP13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 CD80P33681 288 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 GNALP38405 381 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 IL5RAQ01344 420 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 MFGE8Q08431 387 aaPredicted RBP13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 POU4F2Q12837 409 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 ZNF154Q13106 437 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 PRDX4Q13162 271 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 ZNF829Q3KNS6 432 aaPredicted RBP13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 WDR82Q6UXN9 313 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 FTMTQ8N4E7 242 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 FAM81AQ8TBF8 368 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 DACT3Q96B18 629 aaPredicted RBP13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 RNF170Q96K19 258 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 MBOAT4Q96T53 435 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 PAPOLGQ9BWT3 736 aaKnown RBP13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 SSBP3Q9BWW4 388 aaPredicted RBP13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 AASSQ9UDR5 926 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 OR52A1Q9UKL2 312 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 LRCH1Q9Y2L9 728 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 SNX5Q9Y5X3 404 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 R4GMQ9 66 aa13.46□□□□□ -0.25
PDLIM5-212ENST00000509333 TRAV38-1A0A0B4J264 116 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 KIR2DS1A0A191URI9 304 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 METTL15A6NJ78 407 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 A6NLC8 198 aa13.45□□□□□ -0.26
PDLIM5-212ENST00000509333 ANXA2P2A6NMY6 339 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms