RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 MEDAGQ5VYS4 303 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 C1QL2Q7Z5L3 287 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 OR2T27Q8NH04 317 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 TMEM246Q9BRR3 403 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 SSBP3Q9BWW4 388 aaPredicted RBP16.66■□□□□ 0.26
SFXN1-209ENST00000508290 TMPRSS13Q9BYE2 586 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 C7orf69Q9H7B7 122 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 S100A14Q9HCY8 104 aa16.66■□□□□ 0.26
SFXN1-209ENST00000508290 IGHV3-64DA0A0J9YX35 117 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 M0R129 80 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 LGALS8O00214 317 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 PHF1O43189 567 aaPredicted RBP16.65■□□□□ 0.26
SFXN1-209ENST00000508290 MTRF1O75570 445 aaKnown RBP16.65■□□□□ 0.26
SFXN1-209ENST00000508290 GRPP07492 148 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 ATP6V1E1P36543 226 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 POLR2IP36954 125 aaKnown RBP16.65■□□□□ 0.26
SFXN1-209ENST00000508290 CFHR2P36980 270 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 HCCSP53701 268 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 C11orf91Q3C1V1 193 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 OR51G2Q8NGK0 314 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 NANPQ8TBE9 248 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 FAM81AQ8TBF8 368 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 ITPKCQ96DU7 683 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 HIST1H2AAQ96QV6 131 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 PBOV1Q9GZY1 135 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 C1orf123Q9NWV4 160 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 COPS3Q9UNS2 423 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 RHBDD3Q9Y3P4 386 aa16.65■□□□□ 0.26
SFXN1-209ENST00000508290 ZNF816-ZNF321PA0A0X1KG74 233 aa16.64■□□□□ 0.25
SFXN1-209ENST00000508290 LOC110117498-PIK3R3F6TDL0 507 aa16.64■□□□□ 0.25
SFXN1-209ENST00000508290 TCF21O43680 179 aa16.64■□□□□ 0.25
SFXN1-209ENST00000508290 KRT8P05787 483 aa16.64■□□□□ 0.25
SFXN1-209ENST00000508290 ZNF12P17014 697 aa16.64■□□□□ 0.25
SFXN1-209ENST00000508290 ZFP36P26651 326 aaKnown RBP16.64■□□□□ 0.25
SFXN1-209ENST00000508290 GNB2P62879 340 aa16.64■□□□□ 0.25
SFXN1-209ENST00000508290 BTNL3Q6UXE8 466 aa16.64■□□□□ 0.25
SFXN1-209ENST00000508290 ZNF771Q7L3S4 317 aaPredicted RBP16.64■□□□□ 0.25
SFXN1-209ENST00000508290 BCDIN3DQ7Z5W3 292 aaKnown RBP16.64■□□□□ 0.25
SFXN1-209ENST00000508290 PQLC1Q8N2U9 271 aa16.64■□□□□ 0.25
SFXN1-209ENST00000508290 CBR4Q8N4T8 237 aa16.64■□□□□ 0.25
SFXN1-209ENST00000508290 OR1M1Q8NGA1 313 aa16.64■□□□□ 0.25
SFXN1-209ENST00000508290 STMN2Q93045 179 aa16.64■□□□□ 0.25
SFXN1-209ENST00000508290 MYCBPQ99417 103 aaPredicted RBP16.64■□□□□ 0.25
SFXN1-209ENST00000508290 MRI1Q9BV20 369 aa16.64■□□□□ 0.25
SFXN1-209ENST00000508290 TLNRD1Q9H1K6 362 aa16.64■□□□□ 0.25
SFXN1-209ENST00000508290 METTL17Q9H7H0 456 aaPredicted RBP16.64■□□□□ 0.25
SFXN1-209ENST00000508290 CLN8Q9UBY8 286 aa16.64■□□□□ 0.25
SFXN1-209ENST00000508290 R4GMQ9 66 aa16.64■□□□□ 0.25
SFXN1-209ENST00000508290 hCG_1807616A0A1W2PRN6 198 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 OOEPA6NGQ2 149 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 DHRS7CA6NNS2 312 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 MPZL2O60487 215 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 SULT1C4O75897 302 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 IGLV3-1P01715 115 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 PPIAL4GP0DN37 164 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 PSMB10P40306 273 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 PITPNBP48739 271 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 SNRPGP62308 76 aaKnown RBP16.63■□□□□ 0.25
SFXN1-209ENST00000508290 ACTC1P68032 377 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 ACTA1P68133 377 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 RIPPLY1Q0D2K3 151 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 ZNF154Q13106 437 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 PRDX4Q13162 271 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 COMMD2Q86X83 199 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 ZDHHC23Q8IYP9 409 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 SEMA6DQ8NFY4 1073 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 SPATA3Q8NHX4 192 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 EME1Q96AY2 570 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 C12orf43Q96C57 262 aaKnown RBP16.63■□□□□ 0.25
SFXN1-209ENST00000508290 INSIG2Q9Y5U4 225 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 SNX5Q9Y5X3 404 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 MXRA5Q9NR99 2828 aa16.63■□□□□ 0.25
SFXN1-209ENST00000508290 PSMD9O00233 223 aa16.62■□□□□ 0.25
SFXN1-209ENST00000508290 DHRS3O75911 302 aa16.62■□□□□ 0.25
SFXN1-209ENST00000508290 LHBP01229 141 aa16.62■□□□□ 0.25
SFXN1-209ENST00000508290 MUC1P15941 1255 aaPredicted RBP16.62■□□□□ 0.25
SFXN1-209ENST00000508290 ACKR3P25106 362 aa16.62■□□□□ 0.25
SFXN1-209ENST00000508290 BCL2L15Q5TBC7 163 aa16.62■□□□□ 0.25
SFXN1-209ENST00000508290 CD276Q5ZPR3 534 aa16.62■□□□□ 0.25
SFXN1-209ENST00000508290 THAP5Q7Z6K1 395 aa16.62■□□□□ 0.25
SFXN1-209ENST00000508290 CCDC54Q8NEL0 328 aa16.62■□□□□ 0.25
SFXN1-209ENST00000508290 OR10Z1Q8NGY1 313 aa16.62■□□□□ 0.25
SFXN1-209ENST00000508290 OR5P3Q8WZ94 311 aa16.62■□□□□ 0.25
SFXN1-209ENST00000508290 DVL3Q92997 716 aaPredicted RBP16.62■□□□□ 0.25
SFXN1-209ENST00000508290 LYZL4Q96KX0 146 aa16.62■□□□□ 0.25
SFXN1-209ENST00000508290 MDFIQ99750 246 aa16.62■□□□□ 0.25
SFXN1-209ENST00000508290 PCDHGB1Q9Y5G3 927 aa16.62■□□□□ 0.25
SFXN1-209ENST00000508290 OR5B21A6NL26 309 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 RNF212BA8MTL3 300 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 SRSF10O75494 262 aaKnown RBP16.61■□□□□ 0.25
SFXN1-209ENST00000508290 ZNF205O95201 554 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 EPHA1P21709 976 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 MTNR1AP48039 350 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 SEC61A1P61619 476 aaKnown RBP16.61■□□□□ 0.25
SFXN1-209ENST00000508290 OCLNQ16625 522 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 FAM76BQ5HYJ3 339 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 TEX36Q5VZQ5 186 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 PLEKHG7Q6ZR37 379 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 ELMOD2Q8IZ81 293 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 GCSAMQ8N6F7 178 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms