RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ZNF19P17023 458 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 OR12D2P58182 307 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 MAB21L1Q13394 359 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 FDX2Q6P4F2 183 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 IZUMO2Q6UXV1 221 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 TMPRSS11AQ6ZMR5 421 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 DOK3Q7L591 496 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 KRT74Q7RTS7 529 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 OR11L1Q8NGX0 322 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 FAM71F1Q96KD3 344 aaPredicted RBP12.68□□□□□ -0.38
RNF4-210ENST00000508235 FN3KRPQ9HA64 309 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 PLCXD1Q9NUJ7 323 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 CHCHD3Q9NX63 227 aaKnown RBP12.68□□□□□ -0.38
RNF4-210ENST00000508235 TREM2Q9NZC2 230 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 CNOT2Q9NZN8 540 aaKnown RBP12.68□□□□□ -0.38
RNF4-210ENST00000508235 ENPP5Q9UJA9 477 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 EXOSC1Q9Y3B2 195 aaKnown RBP12.68□□□□□ -0.38
RNF4-210ENST00000508235 RHBDD3Q9Y3P4 386 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 CACNG2Q9Y698 323 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 YLPM1P49750 1951 aaKnown RBP12.68□□□□□ -0.38
RNF4-210ENST00000508235 F8P00451 2351 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 A0A1B0GVI7 797 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 DHRS7CA6NNS2 312 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 PIPP12273 146 aaPredicted RBP12.67□□□□□ -0.38
RNF4-210ENST00000508235 ACKR3P25106 362 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 GZMKP49863 264 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 CCR9P51686 369 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 PRDX4Q13162 271 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 TMEM249Q2WGJ8 235 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 SPRNQ5BIV9 151 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 WDR38Q5JTN6 314 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 CLEC9AQ6UXN8 241 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 MOGAT3Q86VF5 341 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 MAPK1IP1LQ8NDC0 245 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 OR2G2Q8NGZ5 317 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 PIGCQ92535 297 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 PPP1R14AQ96A00 147 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 PELI1Q96FA3 418 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 TMEM80Q96HE8 168 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 HIST1H2AAQ96QV6 131 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 MICU1Q9BPX6 476 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 RTL8AQ9BWD3 113 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 DIMT1Q9UNQ2 313 aaKnown RBP12.67□□□□□ -0.38
RNF4-210ENST00000508235 SLC22A13Q9Y226 551 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 WIPI2Q9Y4P8 454 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 NPTNQ9Y639 398 aa12.67□□□□□ -0.38
RNF4-210ENST00000508235 P2RY10O00398 339 aa12.66□□□□□ -0.38
RNF4-210ENST00000508235 SYT7O43581 403 aa12.66□□□□□ -0.38
RNF4-210ENST00000508235 PTBP3O95758 552 aaKnown RBP12.66□□□□□ -0.38
RNF4-210ENST00000508235 CCL1P22362 96 aa12.66□□□□□ -0.38
RNF4-210ENST00000508235 PSMB10P40306 273 aa12.66□□□□□ -0.38
RNF4-210ENST00000508235 VHLP40337 213 aa12.66□□□□□ -0.38
RNF4-210ENST00000508235 GBX2P52951 348 aaPredicted RBP12.66□□□□□ -0.38
RNF4-210ENST00000508235 CDH15P55291 814 aa12.66□□□□□ -0.38
RNF4-210ENST00000508235 MVKQ03426 396 aa12.66□□□□□ -0.38
RNF4-210ENST00000508235 TMEM244Q5VVB8 128 aa12.66□□□□□ -0.38
RNF4-210ENST00000508235 CYB5R2Q6BCY4 276 aa12.66□□□□□ -0.38
RNF4-210ENST00000508235 Q6ZSR3 168 aa12.66□□□□□ -0.38
RNF4-210ENST00000508235 ZDHHC23Q8IYP9 409 aa12.66□□□□□ -0.38
RNF4-210ENST00000508235 Q8TCH9 128 aa12.66□□□□□ -0.38
RNF4-210ENST00000508235 ANKRD60Q9BZ19 345 aa12.66□□□□□ -0.38
RNF4-210ENST00000508235 PLEKHA1Q9HB21 404 aa12.66□□□□□ -0.38
RNF4-210ENST00000508235 PIGLQ9Y2B2 252 aa12.66□□□□□ -0.38
RNF4-210ENST00000508235 CAB39Q9Y376 341 aaPredicted RBP12.66□□□□□ -0.38
RNF4-210ENST00000508235 V9GYS6 101 aa12.66□□□□□ -0.38
RNF4-210ENST00000508235 A0A1B0GTI1 187 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 ISPDA4D126 451 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 LRP5LA4QPB2 252 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 A6NLC8 198 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 TMEM210A6NLX4 147 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 ZNF850A8MQ14 1090 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 TMEM178BH3BS89 294 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 RRP9O43818 475 aaKnown RBP12.65□□□□□ -0.38
RNF4-210ENST00000508235 FSTL3O95633 263 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 LY6G6DO95868 133 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 ISG15P05161 165 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 GRPP07492 148 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 CCDC159P0C7I6 412 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 BTG1P62324 171 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 AVPI1Q5T686 147 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 MUC20Q8N307 709 aaPredicted RBP12.65□□□□□ -0.38
RNF4-210ENST00000508235 PRSS35Q8N3Z0 413 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 STX19Q8N4C7 294 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 KLHL36Q8N4N3 616 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 BPIFB6Q8NFQ5 453 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 ZNF420Q8TAQ5 688 aaPredicted RBP12.65□□□□□ -0.38
RNF4-210ENST00000508235 OR5P3Q8WZ94 311 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 GGHQ92820 318 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 DVL3Q92997 716 aaPredicted RBP12.65□□□□□ -0.38
RNF4-210ENST00000508235 C10orf35Q96D05 121 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 RAB39BQ96DA2 213 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 ITPKCQ96DU7 683 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 SMR3AQ99954 134 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 ZNF649Q9BS31 505 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 SOX7Q9BT81 388 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 SCN3BQ9NY72 215 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 FRRS1LQ9P0K9 344 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 PSORS1C1Q9UIG5 152 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 RAB26Q9ULW5 256 aa12.65□□□□□ -0.38
RNF4-210ENST00000508235 IGHV3-64DA0A0J9YX35 117 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms