RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 REEP6Q96HR9 211 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 RBM4BQ9BQ04 359 aaKnown RBP11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 OR51V1Q9H2C8 321 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 OR5V1Q9UGF6 321 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 NBEAL1Q6ZS30 2694 aa11.63□□□□□ -0.55
PDLIM7-211ENST00000504318 PRR23D1E9PI22 279 aaPredicted RBP11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 EI24O14681 340 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 IGLV3-1P01715 115 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 RPSAP08865 295 aaKnown RBP11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 PRR23D2P0DMB1 279 aaPredicted RBP11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 MMP9P14780 707 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 ALOX5APP20292 161 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 POU1F1P28069 291 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 DDOSTP39656 456 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 SLC15A1P46059 708 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 GSK3AP49840 483 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 GNB2P62879 340 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 ARMCX4Q5H9R4 360 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 SLC35D3Q5M8T2 416 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 SFRP4Q6FHJ7 346 aaPredicted RBP11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 LRRN1Q6UXK5 716 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 FAM57BQ71RH2 274 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 FAM90A1Q86YD7 464 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 PARP8Q8N3A8 854 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 OR8B3Q8NGG8 313 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 OR52H1Q8NGJ2 320 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 ITPKCQ96DU7 683 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 OR8B2Q96RD0 313 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 GABARAPL1Q9H0R8 117 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 PRDM13Q9H4Q3 707 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 FN3KRPQ9HA64 309 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 SMPD3Q9NY59 655 aaPredicted RBP11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 USE1Q9NZ43 259 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 DNAJC27Q9NZQ0 273 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 NOP16Q9Y3C1 178 aaKnown RBP11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 ORC6Q9Y5N6 252 aa11.62□□□□□ -0.55
PDLIM7-211ENST00000504318 A0A1B0GW55 424 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 OOEPA6NGQ2 149 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 C3orf80F5H4A9 247 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 TRIM77I1YAP6 450 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 HMGN1P05114 100 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 ANXA2P07355 339 aaKnown RBP11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 LYNP07948 512 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 DUX4L2P0CJ85 424 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 DUX4L3P0CJ86 424 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 DUX4L4P0CJ87 422 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 DUX4L5P0CJ88 424 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 DUX4L6P0CJ89 424 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 DUX4L7P0CJ90 424 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 AMY2BP19961 511 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 EPHA2P29317 976 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 CFHR2P36980 270 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 CSNK2BP67870 215 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 TAF13Q15543 124 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 FAM76BQ5HYJ3 339 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 DUX4L9Q6RFH8 374 aaPredicted RBP11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 WDR82Q6UXN9 313 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 BPIFB2Q8N4F0 458 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 ZNF454Q8N9F8 522 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 SPERTQ8NA61 448 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 OR1M1Q8NGA1 313 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 OR11L1Q8NGX0 322 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 HPSE2Q8WWQ2 592 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 SLC29A1Q99808 456 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 NUDT16L1Q9BRJ7 211 aaKnown RBP11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 MRI1Q9BV20 369 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 C1orf123Q9NWV4 160 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 KAAG1Q9UBP8 84 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 DUX4Q9UBX2 424 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 COPS3Q9UNS2 423 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 RHBDD3Q9Y3P4 386 aa11.61□□□□□ -0.55
PDLIM7-211ENST00000504318 MAGEA13PA6NCF6 341 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 DNAJC9-AS1A6NH13 148 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 H0YAE9 185 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 TBX1O43435 398 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 PAICSP22234 425 aaKnown RBP11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 HSD11B1P28845 292 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 NAA10P41227 235 aaPredicted RBP11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 HCCSP53701 268 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 CRISP1P54107 249 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 PSMA6P60900 246 aaKnown RBP11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 FGFRL1Q8N441 504 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 OR8B12Q8NGG6 310 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 SEH1LQ96EE3 360 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 PLEKHA8Q96JA3 519 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 JMJD8Q96S16 334 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 RGCCQ9H4X1 137 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 FAM206AQ9NX38 181 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 CLN8Q9UBY8 286 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 LRP12Q9Y561 859 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 N6AMT1Q9Y5N5 214 aa11.6□□□□□ -0.55
PDLIM7-211ENST00000504318 IGHV3OR16-10A0A075B7F0 116 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 TRAV40A0A0B4J280 105 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 SRRM5B3KS81 715 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 CLDN34H7C241 214 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 PRKYO43930 277 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 MITFO75030 526 aaPredicted RBP11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 SRSF10O75494 262 aaKnown RBP11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 APOC1P02654 83 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 ALPLP05186 524 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms