RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 PRDM12Q9H4Q4 367 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 MRPS28Q9Y2Q9 187 aaKnown RBP5.63□□□□□ -1.51
CLCN3-204ENST00000504131 WIPI2Q9Y4P8 454 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 CEMIPQ8WUJ3 1361 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 PXDNQ92626 1479 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 A0A0U1RRA0 63 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 A0A1W2PP18 115 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 TSPAN11A1L157 253 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 CD79AP11912 226 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 PITX1P78337 314 aaPredicted RBP5.63□□□□□ -1.51
CLCN3-204ENST00000504131 CDK5R2Q13319 367 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 MLF2Q15773 248 aaPredicted RBP5.63□□□□□ -1.51
CLCN3-204ENST00000504131 C3orf36Q3SXR2 165 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 MEIG1Q5JSS6 88 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 C6orf136Q5SQH8 315 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 GDPGP1Q6ZNW5 385 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 OR52I1Q8NGK6 324 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 FNDC9Q8TBE3 224 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 HAVCR2Q8TDQ0 301 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 C12orf42Q96LP6 360 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 NRSN2Q9GZP1 204 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 IL21Q9HBE4 155 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 CNOT2Q9NZN8 540 aaKnown RBP5.63□□□□□ -1.51
CLCN3-204ENST00000504131 B4GALT7Q9UBV7 327 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 SPCS1Q9Y6A9 102 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 WNT6Q9Y6F9 365 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 PAPPAQ13219 1627 aa5.63□□□□□ -1.51
CLCN3-204ENST00000504131 PKD1L3Q7Z443 1732 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 TCRBV7S2A1N4TA0A589 114 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 C9orf172C9J069 976 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 G3V3Q6 166 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 TMPRSS2O15393 492 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 SPRY1O43609 319 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF433Q8N7K0 673 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-204ENST00000504131 GLIS3Q8NEA6 775 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 WNT2BQ93097 391 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 TMEM38BQ9NVV0 291 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 GAGE12HA6NDE8 117 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 B4GALT5O43286 388 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 VIPP01282 170 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 EDN1P05305 212 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 ELNP15502 786 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 TAL1P17542 331 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-204ENST00000504131 SRPXP78539 464 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 CYCSP99999 105 aaKnown RBP5.62□□□□□ -1.51
CLCN3-204ENST00000504131 OR10J3Q5JRS4 329 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 COX20Q5RI15 118 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 C1orf195Q5TG92 126 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 CAPN13Q6MZZ7 669 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-204ENST00000504131 C11orf44Q8N8P7 122 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 OR1J2Q8NGS2 313 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 OR1S1Q8NH92 325 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 SMPDL3BQ92485 455 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 BTN2A3PQ96KV6 586 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 HHATLQ9HCP6 504 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 DAPP1Q9UN19 280 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 RPL36Q9Y3U8 105 aaKnown RBP5.62□□□□□ -1.51
CLCN3-204ENST00000504131 TRAPPC1Q9Y5R8 145 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 MBLAC1A4D2B0 266 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-204ENST00000504131 NPIPB5A8MRT5 1133 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 HLA-AP01891 365 aaKnown RBP5.62□□□□□ -1.51
CLCN3-204ENST00000504131 KITLGP21583 273 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 UCNP55089 124 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 GP2P55259 537 aaKnown RBP5.62□□□□□ -1.51
CLCN3-204ENST00000504131 MFGE8Q08431 387 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-204ENST00000504131 ST3GAL2Q16842 350 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 LAIR1Q6GTX8 287 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 WDR82Q6UXN9 313 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 OR1B1Q8NGR6 318 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 NEIL3Q8TAT5 605 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 POPDC3Q9HBV1 291 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 OXSMQ9NWU1 459 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 NUDT4Q9NZJ9 180 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 WSB1Q9Y6I7 421 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 FOXH1O75593 365 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 CTAG2O75638 210 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 TSPAN13O95857 204 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 CTU2Q2VPK5 515 aaKnown RBP5.62□□□□□ -1.51
CLCN3-204ENST00000504131 NHLRC3Q5JS37 347 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 OR4F6Q8NGB9 312 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 OR8B12Q8NGG6 310 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 ADTRPQ96IZ2 230 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 IL17FQ96PD4 163 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 SLC17A4Q9Y2C5 497 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 YBX2Q9Y2T7 364 aaKnown RBP5.62□□□□□ -1.51
CLCN3-204ENST00000504131 MYH8P13535 1937 aa5.62□□□□□ -1.51
CLCN3-204ENST00000504131 FITM1A5D6W6 292 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 SMIM9A6NGZ8 99 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF878C9JN71 531 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 H3BVH4 76 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 KIR2DS3K7RE56 304 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 CFDP00746 253 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 CD3EP07766 207 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ADRA2AP08913 450 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 SMIM17P0DL12 118 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 P2RY1P47900 373 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 LSSP48449 732 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 CNN1P51911 297 aaKnown RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 KIR2DS3Q14952 304 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 POM121L1PQ3SYA9 428 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms