RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 RPS27LQ71UM5 84 aaKnown RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 CMTM4Q8IZR5 234 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 TCTEX1D1Q8N7M0 179 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF676Q8N7Q3 588 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 OR13C4Q8NGS5 318 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 PINX1Q96BK5 328 aaKnown RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 RCC1LQ96I51 464 aaKnown RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 WDR92Q96MX6 357 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 MCHR1Q99705 422 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 PRSS27Q9BQR3 290 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF552Q9H707 407 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 OR14J1Q9UGF5 321 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF230Q9UIE0 474 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 HIF3AQ9Y2N7 669 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 NSG2Q9Y328 171 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 ZANQ9Y493 2812 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 ABCA2Q9BZC7 2435 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 LAMA2P24043 3122 aaKnown RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 HIVEP3Q5T1R4 2406 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 AHCTF1Q8WYP5 2266 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 HEATR5AQ86XA9 2040 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 KIR2DL5BA0A0G2JN68 375 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 KIR2DL5BA0A0G2JPC4 375 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM150BA6NC51 233 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 C1QTNF3-AMACRE9PGA6 284 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 PMP2P02689 132 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 APODP05090 189 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 CEACAM5P06731 702 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 NOVA1P51513 510 aaKnown RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 MAXP61244 160 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 ENDOGQ14249 297 aaKnown RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 RTP5Q14D33 572 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 LY6KQ17RY6 165 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 TCEAL5Q5H9L2 206 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 LRRC73Q5JTD7 316 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 WDR74Q6RFH5 385 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 MBOAT2Q6ZWT7 520 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 FCRLAQ7L513 359 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 LRRTM1Q86UE6 522 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 KIR2DL5AQ8N109 375 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 NAXEQ8NCW5 288 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 PRR7Q8TB68 274 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 CD300LFQ8TDQ1 290 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 AQP3Q92482 292 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 EXTL1Q92935 676 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 NINJ1Q92982 152 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 TVP23CQ96ET8 276 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 MRGPRX1Q96LB2 322 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 SMAD5Q99717 465 aaKnown RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 SYT3Q9BQG1 590 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 GLRX2Q9NS18 164 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 DLL3Q9NYJ7 618 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 HSPB7Q9UBY9 170 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 CHRNA9Q9UGM1 479 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 CACFD1Q9UGQ2 172 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF835Q9Y2P0 537 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 KIF26BQ2KJY2 2108 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 CREBBPQ92793 2442 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 CELSR2Q9HCU4 2923 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 TRAV9-1A0A075B6T8 112 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 TRAV18A0A075B6X5 111 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 ELOA3DA6NLF2 546 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 NPIPA7E9PJI5 369 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 ZFPL1O95159 310 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 IGHG3P01860 377 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 NPIPA8P0DM63 369 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 TFPIP10646 304 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF10P21506 573 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 DIO1P49895 249 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 PTTG1IPP53801 180 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 INSM1Q01101 510 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF616Q08AN1 781 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 EIF4EBP1Q13541 118 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 TRA2AQ13595 282 aaKnown RBP eCLIP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 OR5I1Q13606 314 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 RBM39Q14498 530 aaKnown RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 C17orf64Q86WR6 236 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 TMPRSS12Q86WS5 348 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 PRSS35Q8N3Z0 413 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 D2HGDHQ8N465 521 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF615Q8N8J6 731 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 FNDC9Q8TBE3 224 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 POC1BQ8TC44 478 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 PSMF1Q92530 271 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 OR1F2PQ96R84 312 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 PYGO2Q9BRQ0 406 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 NAA11Q9BSU3 229 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 SCRT1Q9BWW7 348 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 EIF5A2Q9GZV4 153 aaKnown RBP2.48□□□□□ -2.01
NEDD4-204ENST00000503468 OR52D1Q9H346 318 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 SGK2Q9HBY8 427 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF586Q9NXT0 402 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 BET1LQ9NYM9 111 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 MMP17Q9ULZ9 603 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 WIPI2Q9Y4P8 454 aa2.48□□□□□ -2.01
NEDD4-204ENST00000503468 TRAV1-1A0A0B4J248 108 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 PDYNP01213 254 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 MT-ND6P03923 174 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM225BP0DP42 221 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 OR3A2P47893 321 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms