RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 CCR9P51686 369 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 NANOS3P60323 173 aaKnown RBP21.23■□□□□ 0.99
LSM6-202ENST00000502781 CSNK2BP67870 215 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 MVKQ03426 396 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 LOXL1Q08397 574 aaPredicted RBP21.23■□□□□ 0.99
LSM6-202ENST00000502781 ST3GAL4Q11206 333 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 BPIFB6Q8NFQ5 453 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 FRRS1LQ9P0K9 344 aa21.23■□□□□ 0.99
LSM6-202ENST00000502781 CAB39Q9Y376 341 aaPredicted RBP21.23■□□□□ 0.99
LSM6-202ENST00000502781 EXOSC1Q9Y3B2 195 aaKnown RBP21.23■□□□□ 0.99
LSM6-202ENST00000502781 INHBBP09529 407 aa21.22■□□□□ 0.99
LSM6-202ENST00000502781 MRPL28Q13084 256 aaKnown RBP21.22■□□□□ 0.99
LSM6-202ENST00000502781 ZBTB37Q5TC79 503 aa21.22■□□□□ 0.99
LSM6-202ENST00000502781 COMMD2Q86X83 199 aa21.22■□□□□ 0.99
LSM6-202ENST00000502781 OR14K1Q8NGZ2 314 aa21.22■□□□□ 0.99
LSM6-202ENST00000502781 CCL17Q92583 94 aa21.22■□□□□ 0.99
LSM6-202ENST00000502781 DVL3Q92997 716 aaPredicted RBP21.22■□□□□ 0.99
LSM6-202ENST00000502781 FAM71F1Q96KD3 344 aaPredicted RBP21.22■□□□□ 0.99
LSM6-202ENST00000502781 PPP1R3EQ9H7J1 279 aa21.22■□□□□ 0.99
LSM6-202ENST00000502781 PPP1R3CQ9UQK1 317 aa21.22■□□□□ 0.99
LSM6-202ENST00000502781 MPC1Q9Y5U8 109 aa21.22■□□□□ 0.99
LSM6-202ENST00000502781 V9GYS6 101 aa21.22■□□□□ 0.99
LSM6-202ENST00000502781 ZNF816-ZNF321PA0A0X1KG74 233 aa21.21■□□□□ 0.99
LSM6-202ENST00000502781 DHRS7CA6NNS2 312 aa21.21■□□□□ 0.99
LSM6-202ENST00000502781 P2RY10O00398 339 aa21.21■□□□□ 0.99
LSM6-202ENST00000502781 MTRF1O75570 445 aaKnown RBP21.21■□□□□ 0.99
LSM6-202ENST00000502781 USF1P22415 310 aaPredicted RBP21.21■□□□□ 0.99
LSM6-202ENST00000502781 GPR6P46095 362 aaPredicted RBP21.21■□□□□ 0.99
LSM6-202ENST00000502781 DOK3Q7L591 496 aa21.21■□□□□ 0.99
LSM6-202ENST00000502781 SEMA6DQ8NFY4 1073 aa21.21■□□□□ 0.99
LSM6-202ENST00000502781 ERGIC1Q969X5 290 aa21.21■□□□□ 0.99
LSM6-202ENST00000502781 ITPKCQ96DU7 683 aa21.21■□□□□ 0.99
LSM6-202ENST00000502781 PAPOLGQ9BWT3 736 aaKnown RBP21.21■□□□□ 0.99
LSM6-202ENST00000502781 TMEM106BQ9NUM4 274 aa21.21■□□□□ 0.99
LSM6-202ENST00000502781 IGHV4-61A0A0C4DH41 118 aa21.2■□□□□ 0.98
LSM6-202ENST00000502781 LOC100289279A0A1B0GTE1 492 aa21.2■□□□□ 0.98
LSM6-202ENST00000502781 SLC1A7O00341 560 aa21.2■□□□□ 0.98
LSM6-202ENST00000502781 HTR1AP08908 422 aa21.2■□□□□ 0.98
LSM6-202ENST00000502781 RIPPLY1Q0D2K3 151 aa21.2■□□□□ 0.98
LSM6-202ENST00000502781 ZNF181Q2M3W8 571 aa21.2■□□□□ 0.98
LSM6-202ENST00000502781 HAVCR2Q8TDQ0 301 aa21.2■□□□□ 0.98
LSM6-202ENST00000502781 ZNF184Q99676 751 aaPredicted RBP21.2■□□□□ 0.98
LSM6-202ENST00000502781 ABCB9Q9NP78 766 aa21.2■□□□□ 0.98
LSM6-202ENST00000502781 DCAF16Q9NXF7 216 aa21.2■□□□□ 0.98
LSM6-202ENST00000502781 TREM2Q9NZC2 230 aa21.2■□□□□ 0.98
LSM6-202ENST00000502781 CLEC2DQ9UHP7 191 aa21.2■□□□□ 0.98
LSM6-202ENST00000502781 TANC2Q9HCD6 1990 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP21.19■□□□□ 0.98
LSM6-202ENST00000502781 OR4C45A6NMZ5 311 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 CLDN25C9JDP6 229 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 E9PI62 339 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 IFNL4K9M1U5 179 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 SMAD7O15105 426 aaKnown RBP21.19■□□□□ 0.98
LSM6-202ENST00000502781 ISG15P05161 165 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 UBCP0CG48 685 aaKnown RBP21.19■□□□□ 0.98
LSM6-202ENST00000502781 MYL12AP19105 171 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 GNALP38405 381 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 TGM4P49221 684 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 SLC3A1Q07837 685 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 HNRNPA0Q13151 305 aaKnown RBP21.19■□□□□ 0.98
LSM6-202ENST00000502781 PRDX4Q13162 271 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 ALKBH1Q13686 389 aaKnown RBP21.19■□□□□ 0.98
LSM6-202ENST00000502781 TMEM42Q69YG0 159 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 AHSA2Q719I0 299 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 ZNF485Q8NCK3 441 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 MAPK1IP1LQ8NDC0 245 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 CCDC54Q8NEL0 328 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 Q8TCH9 128 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 PIGLQ9Y2B2 252 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 MTORP42345 2549 aa21.19■□□□□ 0.98
LSM6-202ENST00000502781 TEP1Q99973 2627 aaKnown RBP21.19■□□□□ 0.98
LSM6-202ENST00000502781 PPIHO43447 177 aaKnown RBP21.18■□□□□ 0.98
LSM6-202ENST00000502781 CCDC159P0C7I6 412 aa21.18■□□□□ 0.98
LSM6-202ENST00000502781 C21orf33P30042 268 aaPredicted RBP21.18■□□□□ 0.98
LSM6-202ENST00000502781 PMELP40967 661 aa21.18■□□□□ 0.98
LSM6-202ENST00000502781 MZT1Q08AG7 82 aa21.18■□□□□ 0.98
LSM6-202ENST00000502781 ODF4Q2M2E3 257 aa21.18■□□□□ 0.98
LSM6-202ENST00000502781 OR2G6Q5TZ20 316 aa21.18■□□□□ 0.98
LSM6-202ENST00000502781 TMPRSS11AQ6ZMR5 421 aa21.18■□□□□ 0.98
LSM6-202ENST00000502781 KLHL36Q8N4N3 616 aa21.18■□□□□ 0.98
LSM6-202ENST00000502781 OR52N1Q8NH53 320 aa21.18■□□□□ 0.98
LSM6-202ENST00000502781 OR5P3Q8WZ94 311 aa21.18■□□□□ 0.98
LSM6-202ENST00000502781 C14orf119Q9NWQ9 140 aa21.18■□□□□ 0.98
LSM6-202ENST00000502781 ENPP5Q9UJA9 477 aa21.18■□□□□ 0.98
LSM6-202ENST00000502781 CR1P17927 2039 aa21.18■□□□□ 0.98
LSM6-202ENST00000502781 IGHV3-64DA0A0J9YX35 117 aa21.17■□□□□ 0.98
LSM6-202ENST00000502781 A0A1B0GVI7 797 aa21.17■□□□□ 0.98
LSM6-202ENST00000502781 LOC107986453A0A1B0GWG9 222 aa21.17■□□□□ 0.98
LSM6-202ENST00000502781 ZNF850A8MQ14 1090 aa21.17■□□□□ 0.98
LSM6-202ENST00000502781 SYT7O43581 403 aa21.17■□□□□ 0.98
LSM6-202ENST00000502781 FAHP16930 419 aa21.17■□□□□ 0.98
LSM6-202ENST00000502781 MED21Q13503 144 aa21.17■□□□□ 0.98
LSM6-202ENST00000502781 MPPED2Q15777 294 aa21.17■□□□□ 0.98
LSM6-202ENST00000502781 TMEM244Q5VVB8 128 aa21.17■□□□□ 0.98
LSM6-202ENST00000502781 PRAMEF6Q5VXH4 476 aa21.17■□□□□ 0.98
LSM6-202ENST00000502781 WDR86Q86TI4 376 aa21.17■□□□□ 0.98
LSM6-202ENST00000502781 MOGAT3Q86VF5 341 aa21.17■□□□□ 0.98
LSM6-202ENST00000502781 RDH10Q8IZV5 341 aa21.17■□□□□ 0.98
LSM6-202ENST00000502781 OR8S1Q8NH09 359 aa21.17■□□□□ 0.98
LSM6-202ENST00000502781 ZNF420Q8TAQ5 688 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms