RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 IGHV4-38-2P0DP08 117 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 SLC2A5P22732 501 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 CRISP1P54107 249 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 PSMA6P60900 246 aaKnown RBP7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 BNIP1Q12981 228 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 APOFQ13790 326 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 SNAPC1Q16533 368 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 TEX36Q5VZQ5 186 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 CD276Q5ZPR3 534 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 KRT77Q7Z794 578 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 WDR86Q86TI4 376 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 FAM90A1Q86YD7 464 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 FTMTQ8N4E7 242 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 OR1M1Q8NGA1 313 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 OR5K1Q8NHB7 308 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 LRRC29Q8WV35 223 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 ZNF48Q96MX3 618 aaPredicted RBP7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 CADM1Q9BY67 442 aaKnown RBP7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 PRRG3Q9BZD7 231 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 YIPF3Q9GZM5 350 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 NIPAL2Q9H841 368 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 ZMAT3Q9HA38 289 aaKnown RBP7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 RNPEPL1Q9HAU8 725 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 TVP23BQ9NYZ1 205 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 ZNF391Q9UJN7 358 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 LAMP5Q9UJQ1 280 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 LRP12Q9Y561 859 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 MPC1Q9Y5U8 109 aa7.05□□□□□ -1.28
HMGXB4-207ENST00000498212 DNAJC9-AS1A6NH13 148 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 ANXA2P2A6NMY6 339 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 TNFRSF13BO14836 293 aaPredicted RBP7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 LHBP01229 141 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 LIPFP07098 398 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 MRPL3P09001 348 aaKnown RBP7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 MUC1P15941 1255 aaPredicted RBP7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 EGR1P18146 543 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 ALOX5APP20292 161 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 PRTN3P24158 256 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 MTNR1AP48039 350 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 RASSF2P50749 326 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 DAPP51397 102 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 HCCSP53701 268 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 FGF12P61328 243 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 ESRRGP62508 458 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 CSNK2BP67870 215 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 IL5RAQ01344 420 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 BAMBIQ13145 260 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 PTGES3Q15185 160 aaKnown RBP7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 MICBQ29980 383 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 LCN1P1Q5VSP4 162 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 FAHD1Q6P587 224 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 KCTD18Q6PI47 426 aaPredicted RBP7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 WDR82Q6UXN9 313 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 C9orf139Q6ZV77 190 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 C11orf53Q8IXP5 236 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 C3orf56Q8N813 242 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 OR8B12Q8NGG6 310 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 UTP4Q969X6 686 aaKnown RBP7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 ITPKCQ96DU7 683 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 LYZL4Q96KX0 146 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 DUX5Q96PT3 197 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 TEAD3Q99594 435 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 MICU1Q9BPX6 476 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 PCGF1Q9BSM1 259 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 RTL8AQ9BWD3 113 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 MROQ9BYG7 248 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 PPP1R3EQ9H7J1 279 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 SMURF1Q9HCE7 757 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 ABCB9Q9NP78 766 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 KRT84Q9NSB2 600 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 KAAG1Q9UBP8 84 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 KLHDC2Q9Y2U9 406 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 RHBDD3Q9Y3P4 386 aa7.04□□□□□ -1.28
HMGXB4-207ENST00000498212 IGHV3OR15-7A0A075B7D8 119 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 CCDC182A6NF36 153 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 TMEM210A6NLX4 147 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 ZNF850A8MQ14 1090 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 ZNF879B4DU55 563 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 G3V2T6 193 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 PSMD9O00233 223 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 DVL1O14640 695 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 CDIPTO14735 213 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 GPR37O15354 613 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 TMPRSS2O15393 492 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 ATP5HO75947 161 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 TOX4O94842 621 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 CST4P01036 141 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 ACKR3P25106 362 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 CFHR2P36980 270 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 POU4F2Q12837 409 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 FOXL1Q12952 345 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 PRDX4Q13162 271 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 ATP6AP1Q15904 470 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 AWAT1Q58HT5 328 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 GPR157Q5UAW9 335 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 METTL11BQ5VVY1 283 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 DEGS2Q6QHC5 323 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 BRD3OSQ6XYD6 125 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 KCTD8Q6ZWB6 473 aa7.03□□□□□ -1.28
HMGXB4-207ENST00000498212 BTN2A1Q7KYR7 527 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms