RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 CSNK2BP67870 215 aa12.53□□□□□ -0.4
NEK4-206ENST00000496822 POU4F2Q12837 409 aa12.53□□□□□ -0.4
NEK4-206ENST00000496822 BRD3OSQ6XYD6 125 aa12.53□□□□□ -0.4
NEK4-206ENST00000496822 C9orf139Q6ZV77 190 aa12.53□□□□□ -0.4
NEK4-206ENST00000496822 SHFQ7M4L6 423 aa12.53□□□□□ -0.4
NEK4-206ENST00000496822 FAM90A1Q86YD7 464 aa12.53□□□□□ -0.4
NEK4-206ENST00000496822 C11orf53Q8IXP5 236 aa12.53□□□□□ -0.4
NEK4-206ENST00000496822 C3orf56Q8N813 242 aa12.53□□□□□ -0.4
NEK4-206ENST00000496822 SPERTQ8NA61 448 aa12.53□□□□□ -0.4
NEK4-206ENST00000496822 TAF15Q92804 592 aaKnown RBP eCLIP12.53□□□□□ -0.4
NEK4-206ENST00000496822 PKP2Q99959 881 aa12.53□□□□□ -0.4
NEK4-206ENST00000496822 KIF17Q9P2E2 1029 aa12.53□□□□□ -0.4
NEK4-206ENST00000496822 IGHV3OR15-7A0A075B7D8 119 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 ENSAO43768 121 aaKnown RBP12.52□□□□□ -0.41
NEK4-206ENST00000496822 LHBP01229 141 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 SFTPBP07988 381 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 H2BFMP0C1H6 154 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 HKR1P10072 659 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 DDOSTP39656 456 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 GSK3AP49840 483 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 CDK5Q00535 292 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 SLC9A3R2Q15599 337 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 TMEM236Q5W0B7 351 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 RUSC1-AS1Q66K80 236 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 AMIGO2Q86SJ2 522 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 CPOQ8IVL8 374 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 FGFRL1Q8N441 504 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 OR52H1Q8NGJ2 320 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 OR8S1Q8NH09 359 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 OTOSQ8NHW6 89 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 DNAJC9Q8WXX5 260 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 PGAM5Q96HS1 289 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 C9orf16Q9BUW7 83 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 SEMA6AQ9H2E6 1030 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 RASSF4Q9H2L5 321 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 ZNF556Q9HAH1 456 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 RNPEPL1Q9HAU8 725 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 C8orf4Q9NR00 106 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 C14orf119Q9NWQ9 140 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 RHBDD3Q9Y3P4 386 aa12.52□□□□□ -0.41
NEK4-206ENST00000496822 TRAV38-1A0A0B4J264 116 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 A0A1B0GW55 424 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 LYNP07948 512 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 DUX4L2P0CJ85 424 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 DUX4L3P0CJ86 424 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 DUX4L4P0CJ87 422 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 DUX4L5P0CJ88 424 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 DUX4L6P0CJ89 424 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 DUX4L7P0CJ90 424 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 ANXA8P13928 327 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 SLC2A5P22732 501 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 ACKR3P25106 362 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 CFHR2P36980 270 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 KCNJ8Q15842 424 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 TEX36Q5VZQ5 186 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 DUX4L9Q6RFH8 374 aaPredicted RBP12.51□□□□□ -0.41
NEK4-206ENST00000496822 OR1M1Q8NGA1 313 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 THEM6Q8WUY1 208 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 LRRC29Q8WV35 223 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 EME1Q96AY2 570 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 SEH1LQ96EE3 360 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 LYZL4Q96KX0 146 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 TBX15Q96SF7 602 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 PCGF1Q9BSM1 259 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 PAPOLGQ9BWT3 736 aaKnown RBP12.51□□□□□ -0.41
NEK4-206ENST00000496822 FGF23Q9GZV9 251 aaPredicted RBP12.51□□□□□ -0.41
NEK4-206ENST00000496822 OR10A2Q9H208 303 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 ERVK-18Q9QC07 812 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 DUX4Q9UBX2 424 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 ENOPH1Q9UHY7 261 aa12.51□□□□□ -0.41
NEK4-206ENST00000496822 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.5□□□□□ -0.41
NEK4-206ENST00000496822 PRODHO43272 600 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 APOC1P02654 83 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 RNASE1P07998 156 aaKnown RBP12.5□□□□□ -0.41
NEK4-206ENST00000496822 MMP9P14780 707 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 NPY4RP50391 375 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 HCCSP53701 268 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 SLC34A1Q06495 639 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 MZT1Q08AG7 82 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 DEFB112Q30KQ8 113 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 WDR82Q6UXN9 313 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 RHOUQ7L0Q8 258 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 OR8B12Q8NGG6 310 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 ITPKCQ96DU7 683 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 VCXQ9H320 206 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 VCX3BQ9H321 246 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 SP140LQ9H930 580 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 ZMAT3Q9HA38 289 aaKnown RBP12.5□□□□□ -0.41
NEK4-206ENST00000496822 SLC25A19Q9HC21 320 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 TRIM36Q9NQ86 728 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 OAZ3Q9UMX2 235 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 PCDHGB1Q9Y5G3 927 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 ORC6Q9Y5N6 252 aa12.5□□□□□ -0.41
NEK4-206ENST00000496822 CCDC182A6NF36 153 aa12.49□□□□□ -0.41
NEK4-206ENST00000496822 SAC3D1A6NKF1 404 aa12.49□□□□□ -0.41
NEK4-206ENST00000496822 PRR32B1ATL7 298 aa12.49□□□□□ -0.41
NEK4-206ENST00000496822 ZNF879B4DU55 563 aa12.49□□□□□ -0.41
NEK4-206ENST00000496822 CLDN34H7C241 214 aa12.49□□□□□ -0.41
NEK4-206ENST00000496822 DVL1O14640 695 aa12.49□□□□□ -0.41
NEK4-206ENST00000496822 ATP6V1G2O95670 118 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms