RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 KIR2DS1A0A191URI9 304 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 ACOD1A6NK06 481 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 G3V2T6 193 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 HAX1O00165 279 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 FASP25445 335 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 COMPP49747 757 aaPredicted RBP13.09□□□□□ -0.31
HDAC4-213ENST00000496347 DAPP51397 102 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 ROM1Q03395 351 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 TEX36Q5VZQ5 186 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 CD276Q5ZPR3 534 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 ZNF841Q6ZN19 808 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 KRT77Q7Z794 578 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 WDR86Q86TI4 376 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 ZDHHC13Q8IUH4 622 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 GALNT4Q8N4A0 578 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 GCSAMQ8N6F7 178 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 C19orf18Q8NEA5 215 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 OR1M1Q8NGA1 313 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 OR8B12Q8NGG6 310 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 ASB17Q8WXJ9 295 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 C22orf15Q8WYQ4 148 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 C12orf43Q96C57 262 aaKnown RBP13.09□□□□□ -0.31
HDAC4-213ENST00000496347 ITPKCQ96DU7 683 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 DUS3LQ96G46 650 aaKnown RBP13.09□□□□□ -0.31
HDAC4-213ENST00000496347 MICU1Q9BPX6 476 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 RTL8AQ9BWD3 113 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 MROQ9BYG7 248 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 ESM1Q9NQ30 184 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 ERVK-18Q9QC07 812 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 CTSZQ9UBR2 303 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 ZNF69Q9UC07 566 aa13.09□□□□□ -0.31
HDAC4-213ENST00000496347 TRAV40A0A0B4J280 105 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 A0A0U1RQV5 110 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 SLC22A31A6NKX4 558 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 TMEM210A6NLX4 147 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 C22orf46C9J442 243 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 ADAM20O43506 726 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 PRKYO43930 277 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 ZNF254O75437 659 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 PLATP00750 562 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 CST4P01036 141 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 LHBP01229 141 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 MUC1P15941 1255 aaPredicted RBP13.08□□□□□ -0.32
HDAC4-213ENST00000496347 ACKR3P25106 362 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 DCTDP32321 178 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 CFHR2P36980 270 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 ZNF829Q3KNS6 432 aaPredicted RBP13.08□□□□□ -0.32
HDAC4-213ENST00000496347 KDM4DQ6B0I6 523 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 SFRP4Q6FHJ7 346 aaPredicted RBP13.08□□□□□ -0.32
HDAC4-213ENST00000496347 LYPD2Q6UXB3 125 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 C12orf54Q6X4T0 127 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 ZNF826PQ6ZT77 177 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 FAM90A1Q86YD7 464 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 ZDHHC22Q8N966 263 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 BOLLQ8N9W6 283 aaKnown RBP13.08□□□□□ -0.32
HDAC4-213ENST00000496347 TEAD3Q99594 435 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 KAAG1Q9UBP8 84 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 RHBDD3Q9Y3P4 386 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 AP4S1Q9Y587 144 aa13.08□□□□□ -0.32
HDAC4-213ENST00000496347 ZAR1LA6NP61 321 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 LIPFP07098 398 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 MRPL3P09001 348 aaKnown RBP13.07□□□□□ -0.32
HDAC4-213ENST00000496347 IGHV4-38-2P0DP08 117 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 EGR1P18146 543 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 UBA52P62987 128 aaKnown RBP13.07□□□□□ -0.32
HDAC4-213ENST00000496347 CSNK2BP67870 215 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 HOXA4Q00056 320 aaPredicted RBP13.07□□□□□ -0.32
HDAC4-213ENST00000496347 MICBQ29980 383 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 SLX4IPQ5VYV7 408 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 NXNL2Q5VZ03 156 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 C12orf73Q69YU5 71 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 WDR82Q6UXN9 313 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 GID4Q8IVV7 300 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 ZNF679Q8IYX0 411 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 SIGLECL1Q8N7X8 197 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 FAM81AQ8TBF8 368 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 LRRC29Q8WV35 223 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 OR8B4Q96RC9 309 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 MNTQ99583 582 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 MS4A7Q9GZW8 240 aaPredicted RBP13.07□□□□□ -0.32
HDAC4-213ENST00000496347 MOB1AQ9H8S9 216 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 FAM206AQ9NX38 181 aa13.07□□□□□ -0.32
HDAC4-213ENST00000496347 TMEM269A0A1B0GVZ9 245 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 TMEM89A2RUT3 159 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 DNAJC9-AS1A6NH13 148 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 SRRM5B3KS81 715 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 CLDN34H7C241 214 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 TNFRSF13BO14836 293 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-213ENST00000496347 TMPRSS2O15393 492 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 CIB2O75838 187 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 GYPAP02724 150 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 ATP6V1B1P15313 513 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 MTNR1AP48039 350 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 BPIFB3P59826 476 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 PRDX4Q13162 271 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 KRT74Q7RTS7 529 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 C11orf53Q8IXP5 236 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 ZDHHC23Q8IYP9 409 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 PNLDC1Q8NA58 520 aaKnown RBP13.06□□□□□ -0.32
HDAC4-213ENST00000496347 TMEM163Q8TC26 289 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms