RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 HACD4Q5VWC8 232 aa14.19□□□□□ -0.14
HLA-A-208ENST00000496081 MTFR2Q6P444 385 aa14.19□□□□□ -0.14
HLA-A-208ENST00000496081 CRIP3Q6Q6R5 217 aa14.19□□□□□ -0.14
HLA-A-208ENST00000496081 C3P1Q6ZMU1 363 aa14.19□□□□□ -0.14
HLA-A-208ENST00000496081 CCDC36Q8IYA8 594 aa14.19□□□□□ -0.14
HLA-A-208ENST00000496081 PAQR4Q8N4S7 273 aaPredicted RBP14.19□□□□□ -0.14
HLA-A-208ENST00000496081 ZNF610Q8N9Z0 462 aa14.19□□□□□ -0.14
HLA-A-208ENST00000496081 NAXEQ8NCW5 288 aa14.19□□□□□ -0.14
HLA-A-208ENST00000496081 NPRL2Q8WTW4 380 aa14.19□□□□□ -0.14
HLA-A-208ENST00000496081 PTX4Q96A99 478 aa14.19□□□□□ -0.14
HLA-A-208ENST00000496081 APOBEC3DQ96AK3 386 aaPredicted RBP14.19□□□□□ -0.14
HLA-A-208ENST00000496081 CNTNAP3BQ96NU0 1288 aa14.19□□□□□ -0.14
HLA-A-208ENST00000496081 CNTNAP3Q9BZ76 1288 aa14.19□□□□□ -0.14
HLA-A-208ENST00000496081 SLC22A4Q9H015 551 aa14.19□□□□□ -0.14
HLA-A-208ENST00000496081 ATG5Q9H1Y0 275 aa14.19□□□□□ -0.14
HLA-A-208ENST00000496081 AUNIPQ9H7T9 357 aa14.19□□□□□ -0.14
HLA-A-208ENST00000496081 DIABLOQ9NR28 239 aa14.19□□□□□ -0.14
HLA-A-208ENST00000496081 PROCRQ9UNN8 238 aa14.19□□□□□ -0.14
HLA-A-208ENST00000496081 A0A1W2PR80 420 aa14.18□□□□□ -0.14
HLA-A-208ENST00000496081 FUOMA2VDF0 154 aa14.18□□□□□ -0.14
HLA-A-208ENST00000496081 GGT3PA6NGU5 568 aa14.18□□□□□ -0.14
HLA-A-208ENST00000496081 LYRM1O43325 122 aa14.18□□□□□ -0.14
HLA-A-208ENST00000496081 NGFP01138 241 aa14.18□□□□□ -0.14
HLA-A-208ENST00000496081 PTHLHP12272 177 aa14.18□□□□□ -0.14
HLA-A-208ENST00000496081 OR3A4PP47883 348 aa14.18□□□□□ -0.14
HLA-A-208ENST00000496081 UBE2NP61088 152 aaKnown RBP14.18□□□□□ -0.14
HLA-A-208ENST00000496081 UNC119Q13432 240 aa14.18□□□□□ -0.14
HLA-A-208ENST00000496081 KISS1Q15726 138 aa14.18□□□□□ -0.14
HLA-A-208ENST00000496081 AWAT2Q6E213 333 aa14.18□□□□□ -0.14
HLA-A-208ENST00000496081 BOD1Q96IK1 185 aa14.18□□□□□ -0.14
HLA-A-208ENST00000496081 OPN3Q9H1Y3 402 aaPredicted RBP14.18□□□□□ -0.14
HLA-A-208ENST00000496081 MRPS28Q9Y2Q9 187 aaKnown RBP14.18□□□□□ -0.14
HLA-A-208ENST00000496081 GABARAPH6UMI1 98 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 GMDSO60547 372 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 IL2RAP01589 272 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 VSIG8P0DPA2 414 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 ZNF14P17017 642 aaPredicted RBP14.17□□□□□ -0.14
HLA-A-208ENST00000496081 RAB6AP20340 208 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 TIMP3P35625 211 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 SRP9P49458 86 aaKnown RBP14.17□□□□□ -0.14
HLA-A-208ENST00000496081 TMEM42Q69YG0 159 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 SLC30A7Q8NEW0 376 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 OR52I2Q8NH67 350 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 C15orf40Q8WUR7 153 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 PHF21AQ96BD5 680 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 SNRNP40Q96DI7 357 aaKnown RBP14.17□□□□□ -0.14
HLA-A-208ENST00000496081 C1orf147Q96MC9 270 aaPredicted RBP14.17□□□□□ -0.14
HLA-A-208ENST00000496081 GPER1Q99527 375 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 SLX1AQ9BQ83 275 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 REPIN1Q9BWE0 567 aaKnown RBP14.17□□□□□ -0.14
HLA-A-208ENST00000496081 GPR173Q9NS66 373 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 STARD10Q9Y365 291 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 TRAV18A0A075B6X5 111 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 HOXD4P09016 255 aaPredicted RBP14.17□□□□□ -0.14
HLA-A-208ENST00000496081 HOXB1P14653 301 aaPredicted RBP14.17□□□□□ -0.14
HLA-A-208ENST00000496081 WNT5AP41221 380 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 BCAP31P51572 246 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 MRPS10P82664 201 aaKnown RBP14.17□□□□□ -0.14
HLA-A-208ENST00000496081 PMPCAQ10713 525 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 GK2Q14410 553 aaPredicted RBP14.17□□□□□ -0.14
HLA-A-208ENST00000496081 EIF2S3LQ2VIR3 472 aaKnown RBP14.17□□□□□ -0.14
HLA-A-208ENST00000496081 GLIPR1L1Q6UWM5 242 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 ZNF101Q8IZC7 436 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 C1orf162Q8NEQ5 155 aaPredicted RBP14.17□□□□□ -0.14
HLA-A-208ENST00000496081 PIGTQ969N2 578 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 GAL3ST1Q99999 423 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 RBFOX1Q9NWB1 397 aaKnown RBP14.17□□□□□ -0.14
HLA-A-208ENST00000496081 FBLN5Q9UBX5 448 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 TUBD1Q9UJT1 453 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 RAB22AQ9UL26 194 aa14.17□□□□□ -0.14
HLA-A-208ENST00000496081 TPRP12270 2363 aaKnown RBP14.16□□□□□ -0.14
HLA-A-208ENST00000496081 TMEM14DPA8MWL7 114 aa14.16□□□□□ -0.14
HLA-A-208ENST00000496081 ORC5O43913 435 aa14.16□□□□□ -0.14
HLA-A-208ENST00000496081 KIR2DL3P43628 341 aa14.16□□□□□ -0.14
HLA-A-208ENST00000496081 PRR30Q53SZ7 412 aaPredicted RBP14.16□□□□□ -0.14
HLA-A-208ENST00000496081 CLVS2Q5SYC1 327 aa14.16□□□□□ -0.14
HLA-A-208ENST00000496081 MZT2BQ6NZ67 158 aa14.16□□□□□ -0.14
HLA-A-208ENST00000496081 DNM1P46Q6ZS02 220 aa14.16□□□□□ -0.14
HLA-A-208ENST00000496081 KRT74Q7RTS7 529 aa14.16□□□□□ -0.14
HLA-A-208ENST00000496081 MYPOPQ86VE0 399 aaPredicted RBP14.16□□□□□ -0.14
HLA-A-208ENST00000496081 CXorf67Q86X51 503 aaPredicted RBP14.16□□□□□ -0.14
HLA-A-208ENST00000496081 TOMM5Q8N4H5 51 aa14.16□□□□□ -0.14
HLA-A-208ENST00000496081 CELF2-AS1Q8N7Q2 184 aa14.16□□□□□ -0.14
HLA-A-208ENST00000496081 FCAMRQ8WWV6 532 aa14.16□□□□□ -0.14
HLA-A-208ENST00000496081 MEIOCA2RUB1 952 aa14.15□□□□□ -0.14
HLA-A-208ENST00000496081 PFDN1O60925 122 aa14.15□□□□□ -0.14
HLA-A-208ENST00000496081 CELA3BP08861 270 aa14.15□□□□□ -0.14
HLA-A-208ENST00000496081 CEACAM8P31997 349 aaPredicted RBP14.15□□□□□ -0.14
HLA-A-208ENST00000496081 GDNFP39905 211 aa14.15□□□□□ -0.14
HLA-A-208ENST00000496081 PTGFRP43088 359 aa14.15□□□□□ -0.14
HLA-A-208ENST00000496081 MALLQ13021 153 aa14.15□□□□□ -0.14
HLA-A-208ENST00000496081 GPR176Q14439 515 aa14.15□□□□□ -0.14
HLA-A-208ENST00000496081 P2RY6Q15077 328 aa14.15□□□□□ -0.14
HLA-A-208ENST00000496081 MOGAT2Q3SYC2 334 aa14.15□□□□□ -0.14
HLA-A-208ENST00000496081 DOLPP1Q86YN1 238 aa14.15□□□□□ -0.14
HLA-A-208ENST00000496081 WDR31Q8NA23 367 aa14.15□□□□□ -0.14
HLA-A-208ENST00000496081 PNLDC1Q8NA58 520 aaKnown RBP14.15□□□□□ -0.14
HLA-A-208ENST00000496081 OR5D18Q8NGL1 313 aa14.15□□□□□ -0.14
HLA-A-208ENST00000496081 UBASH3BQ8TF42 649 aa14.15□□□□□ -0.14
HLA-A-208ENST00000496081 ITFG2Q969R8 447 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms