RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 TRAV38-1A0A0B4J264 116 aa27.69■■■□□ 2.02
CBX4-203ENST00000494546 OOEPA6NGQ2 149 aa27.69■■■□□ 2.02
CBX4-203ENST00000494546 PSMB10P40306 273 aa27.69■■■□□ 2.02
CBX4-203ENST00000494546 WDR25Q64LD2 544 aaPredicted RBP27.69■■■□□ 2.02
CBX4-203ENST00000494546 GCSAMQ8N6F7 178 aa27.69■■■□□ 2.02
CBX4-203ENST00000494546 OR1M1Q8NGA1 313 aa27.69■■■□□ 2.02
CBX4-203ENST00000494546 IL4I1Q96RQ9 567 aa27.69■■■□□ 2.02
CBX4-203ENST00000494546 CIB1Q99828 191 aa27.69■■■□□ 2.02
CBX4-203ENST00000494546 COPS3Q9UNS2 423 aa27.69■■■□□ 2.02
CBX4-203ENST00000494546 TMEM14AQ9Y6G1 99 aa27.69■■■□□ 2.02
CBX4-203ENST00000494546 ANXA2P2A6NMY6 339 aa27.68■■■□□ 2.02
CBX4-203ENST00000494546 PHYHO14832 338 aa27.68■■■□□ 2.02
CBX4-203ENST00000494546 ACKR3P25106 362 aa27.68■■■□□ 2.02
CBX4-203ENST00000494546 CSNK2BP67870 215 aa27.68■■■□□ 2.02
CBX4-203ENST00000494546 ZNF841Q6ZN19 808 aa27.68■■■□□ 2.02
CBX4-203ENST00000494546 ASRGL1Q7L266 308 aa27.68■■■□□ 2.02
CBX4-203ENST00000494546 CENPNQ96H22 339 aaPredicted RBP27.68■■■□□ 2.02
CBX4-203ENST00000494546 JMJD8Q96S16 334 aa27.68■■■□□ 2.02
CBX4-203ENST00000494546 TRIM36Q9NQ86 728 aa27.68■■■□□ 2.02
CBX4-203ENST00000494546 NUP50Q9UKX7 468 aa27.68■■■□□ 2.02
CBX4-203ENST00000494546 OAZ3Q9UMX2 235 aa27.68■■■□□ 2.02
CBX4-203ENST00000494546 TMEM269A0A1B0GVZ9 245 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 ZNF850A8MQ14 1090 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 PRR32B1ATL7 298 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 EGR1P18146 543 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 KLF17Q5JT82 389 aaPredicted RBP27.67■■■□□ 2.02
CBX4-203ENST00000494546 AADACL4Q5VUY2 407 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 NXNL2Q5VZ03 156 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 DEGS2Q6QHC5 323 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 C11orf53Q8IXP5 236 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 LRRC29Q8WV35 223 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 ASB17Q8WXJ9 295 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 PIGCQ92535 297 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 TECTBQ96PL2 329 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 MICU1Q9BPX6 476 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 NUDT16L1Q9BRJ7 211 aaKnown RBP27.67■■■□□ 2.02
CBX4-203ENST00000494546 FAM206AQ9NX38 181 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 ERVK-18Q9QC07 812 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 CTSZQ9UBR2 303 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 ZNF391Q9UJN7 358 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 IKZF2Q9UKS7 526 aa27.67■■■□□ 2.02
CBX4-203ENST00000494546 SAC3D1A6NKF1 404 aa27.66■■■□□ 2.02
CBX4-203ENST00000494546 SLC22A31A6NKX4 558 aa27.66■■■□□ 2.02
CBX4-203ENST00000494546 ADAM20O43506 726 aa27.66■■■□□ 2.02
CBX4-203ENST00000494546 GYPAP02724 150 aa27.66■■■□□ 2.02
CBX4-203ENST00000494546 EFNB1P98172 346 aa27.66■■■□□ 2.02
CBX4-203ENST00000494546 IL5RAQ01344 420 aa27.66■■■□□ 2.02
CBX4-203ENST00000494546 PRDX4Q13162 271 aa27.66■■■□□ 2.02
CBX4-203ENST00000494546 ZNF679Q8IYX0 411 aa27.66■■■□□ 2.02
CBX4-203ENST00000494546 ZFAND2BQ8WV99 257 aa27.66■■■□□ 2.02
CBX4-203ENST00000494546 PYDC1Q8WXC3 89 aa27.66■■■□□ 2.02
CBX4-203ENST00000494546 DACT3Q96B18 629 aaPredicted RBP27.66■■■□□ 2.02
CBX4-203ENST00000494546 ITPKCQ96DU7 683 aa27.66■■■□□ 2.02
CBX4-203ENST00000494546 OR8B4Q96RC9 309 aa27.66■■■□□ 2.02
CBX4-203ENST00000494546 MPC1Q9Y5U8 109 aa27.66■■■□□ 2.02
CBX4-203ENST00000494546 IGHV3OR15-7A0A075B7D8 119 aa27.65■■■□□ 2.02
CBX4-203ENST00000494546 LHBP01229 141 aa27.65■■■□□ 2.02
CBX4-203ENST00000494546 ROM1Q03395 351 aa27.65■■■□□ 2.02
CBX4-203ENST00000494546 POU4F2Q12837 409 aa27.65■■■□□ 2.02
CBX4-203ENST00000494546 CCDC121Q6ZUS5 278 aa27.65■■■□□ 2.02
CBX4-203ENST00000494546 COMMD2Q86X83 199 aa27.65■■■□□ 2.02
CBX4-203ENST00000494546 GALNT4Q8N4A0 578 aa27.65■■■□□ 2.02
CBX4-203ENST00000494546 FAM81AQ8TBF8 368 aa27.65■■■□□ 2.02
CBX4-203ENST00000494546 RTL8AQ9BWD3 113 aa27.65■■■□□ 2.02
CBX4-203ENST00000494546 RIBC2Q9H4K1 309 aa27.65■■■□□ 2.02
CBX4-203ENST00000494546 RNPEPL1Q9HAU8 725 aa27.65■■■□□ 2.02
CBX4-203ENST00000494546 KIR2DS1A0A191URI9 304 aa27.64■■■□□ 2.02
CBX4-203ENST00000494546 NDUFA2O43678 99 aa27.64■■■□□ 2.02
CBX4-203ENST00000494546 ZNF254O75437 659 aa27.64■■■□□ 2.02
CBX4-203ENST00000494546 CST4P01036 141 aa27.64■■■□□ 2.02
CBX4-203ENST00000494546 POLR2IP36954 125 aaKnown RBP27.64■■■□□ 2.02
CBX4-203ENST00000494546 NPY4RP50391 375 aa27.64■■■□□ 2.02
CBX4-203ENST00000494546 RIDAP52758 137 aaKnown RBP27.64■■■□□ 2.02
CBX4-203ENST00000494546 FAM90A1Q86YD7 464 aa27.64■■■□□ 2.02
CBX4-203ENST00000494546 SLC35F2Q8IXU6 374 aa27.64■■■□□ 2.02
CBX4-203ENST00000494546 PBOV1Q9GZY1 135 aa27.64■■■□□ 2.02
CBX4-203ENST00000494546 ADGRL4Q9HBW9 690 aa27.64■■■□□ 2.02
CBX4-203ENST00000494546 ZNF69Q9UC07 566 aa27.64■■■□□ 2.02
CBX4-203ENST00000494546 IGHV3OR16-10A0A075B7F0 116 aa27.63■■■□□ 2.01
CBX4-203ENST00000494546 ACOD1A6NK06 481 aa27.63■■■□□ 2.01
CBX4-203ENST00000494546 TRIM77I1YAP6 450 aa27.63■■■□□ 2.01
CBX4-203ENST00000494546 CDIPTO14735 213 aa27.63■■■□□ 2.01
CBX4-203ENST00000494546 TNFRSF13BO14836 293 aaPredicted RBP27.63■■■□□ 2.01
CBX4-203ENST00000494546 CXCR4P61073 352 aa27.63■■■□□ 2.01
CBX4-203ENST00000494546 ZNF829Q3KNS6 432 aaPredicted RBP27.63■■■□□ 2.01
CBX4-203ENST00000494546 WDR82Q6UXN9 313 aa27.63■■■□□ 2.01
CBX4-203ENST00000494546 GID4Q8IVV7 300 aa27.63■■■□□ 2.01
CBX4-203ENST00000494546 PKP2Q99959 881 aa27.63■■■□□ 2.01
CBX4-203ENST00000494546 ABCB9Q9NP78 766 aa27.63■■■□□ 2.01
CBX4-203ENST00000494546 A0A0U1RQV5 110 aa27.62■■■□□ 2.01
CBX4-203ENST00000494546 C22orf46C9J442 243 aa27.62■■■□□ 2.01
CBX4-203ENST00000494546 DCTDP32321 178 aa27.62■■■□□ 2.01
CBX4-203ENST00000494546 TEX36Q5VZQ5 186 aa27.62■■■□□ 2.01
CBX4-203ENST00000494546 ZNF322Q6U7Q0 402 aaPredicted RBP27.62■■■□□ 2.01
CBX4-203ENST00000494546 KCTD8Q6ZWB6 473 aa27.62■■■□□ 2.01
CBX4-203ENST00000494546 OR5P3Q8WZ94 311 aa27.62■■■□□ 2.01
CBX4-203ENST00000494546 RASSF4Q9H2L5 321 aa27.62■■■□□ 2.01
CBX4-203ENST00000494546 ENSAO43768 121 aaKnown RBP27.61■■■□□ 2.01
CBX4-203ENST00000494546 PPIAL4GP0DN37 164 aa27.61■■■□□ 2.01
CBX4-203ENST00000494546 MAP2K3P46734 347 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms