RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 RDH12Q96NR8 316 aa7.38□□□□□ -1.23
ITGB1-217ENST00000494395 SP140LQ9H930 580 aa7.38□□□□□ -1.23
ITGB1-217ENST00000494395 TMEM106BQ9NUM4 274 aa7.38□□□□□ -1.23
ITGB1-217ENST00000494395 TMEM100Q9NV29 134 aa7.38□□□□□ -1.23
ITGB1-217ENST00000494395 TMEM160Q9NX00 188 aa7.38□□□□□ -1.23
ITGB1-217ENST00000494395 IMPAD1Q9NX62 359 aa7.38□□□□□ -1.23
ITGB1-217ENST00000494395 TREM2Q9NZC2 230 aa7.38□□□□□ -1.23
ITGB1-217ENST00000494395 MRPL15Q9P015 296 aaKnown RBP7.38□□□□□ -1.23
ITGB1-217ENST00000494395 NUFIP1Q9UHK0 495 aaKnown RBP7.38□□□□□ -1.23
ITGB1-217ENST00000494395 MRM2Q9UI43 246 aaKnown RBP7.38□□□□□ -1.23
ITGB1-217ENST00000494395 PPP1R3CQ9UQK1 317 aa7.38□□□□□ -1.23
ITGB1-217ENST00000494395 GMPPBQ9Y5P6 360 aa7.38□□□□□ -1.23
ITGB1-217ENST00000494395 NF1P21359 2839 aa7.38□□□□□ -1.23
ITGB1-217ENST00000494395 SONP18583 2426 aaKnown RBP7.38□□□□□ -1.23
ITGB1-217ENST00000494395 A0A0U1RQV5 110 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 LOC100130705A0A1B0GUX0 176 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 A0A1W2PQL4 384 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-217ENST00000494395 GGT3PA6NGU5 568 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 FAM157AC9JC47 383 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 ZNF670-ZNF695F2Z2N8 137 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 TMEM178BH3BS89 294 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 IFNL4K9M1U5 179 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 PHYHO14832 338 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 MAGEB4O15481 346 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-217ENST00000494395 GMDSO60547 372 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 IGHV2-5P01817 119 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 TTRP02766 147 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 OR2T7P0C7T2 308 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 CA6P23280 308 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 CFL1P23528 166 aaKnown RBP7.37□□□□□ -1.23
ITGB1-217ENST00000494395 PEX2P28328 305 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 SRP9P49458 86 aaKnown RBP7.37□□□□□ -1.23
ITGB1-217ENST00000494395 RIDAP52758 137 aaKnown RBP7.37□□□□□ -1.23
ITGB1-217ENST00000494395 ELF3P78545 371 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-217ENST00000494395 MVKQ03426 396 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 ZNF85Q03923 595 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 EGR3Q06889 387 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 SLC3A1Q07837 685 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 OR8G1Q15617 311 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 TIGD6Q17RP2 521 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 OGFRL1Q5TC84 451 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-217ENST00000494395 MEDAGQ5VYS4 303 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 LPCAT4Q643R3 524 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 CYB5R2Q6BCY4 276 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 Q6ZSR3 168 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 KLBQ86Z14 1044 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-217ENST00000494395 OR2T27Q8NH04 317 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 ZNF420Q8TAQ5 688 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-217ENST00000494395 Q8TCH9 128 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 APH1BQ8WW43 257 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 SPRYD4Q8WW59 207 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-217ENST00000494395 DVL3Q92997 716 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-217ENST00000494395 RFKQ969G6 155 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 PGAM5Q96HS1 289 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 APOL4Q9BPW4 351 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 ADAT1Q9BUB4 502 aaKnown RBP7.37□□□□□ -1.23
ITGB1-217ENST00000494395 MROQ9BYG7 248 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 SLC22A4Q9H015 551 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 OR10A2Q9H208 303 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 RGCCQ9H4X1 137 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 NARFLQ9H6Q4 476 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 PPP1R3EQ9H7J1 279 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 G6PC2Q9NQR9 355 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 SMPD3Q9NY59 655 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-217ENST00000494395 AASSQ9UDR5 926 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 ZNF391Q9UJN7 358 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 NOP16Q9Y3C1 178 aaKnown RBP7.37□□□□□ -1.23
ITGB1-217ENST00000494395 N6AMT1Q9Y5N5 214 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 NPTNQ9Y639 398 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 ARHGAP32A7KAX9 2087 aa7.37□□□□□ -1.23
ITGB1-217ENST00000494395 SETD2Q9BYW2 2564 aaPredicted RBP7.36□□□□□ -1.23
ITGB1-217ENST00000494395 NIPBLQ6KC79 2804 aaeCLIP7.36□□□□□ -1.232e-6■■■■■ 44.5
ITGB1-217ENST00000494395 NAV3Q8IVL0 2385 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 TMEM269A0A1B0GVZ9 245 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 A8MV72 311 aaPredicted RBP7.36□□□□□ -1.23
ITGB1-217ENST00000494395 F5H0A9 414 aaPredicted RBP7.36□□□□□ -1.23
ITGB1-217ENST00000494395 CRLF1O75462 422 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 FSTL3O95633 263 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 MTNR1AP48039 350 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 ZNF91Q05481 1191 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 ZMYND11Q15326 602 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 MPPED2Q15777 294 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 LRRC36Q1X8D7 754 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 ZNF829Q3KNS6 432 aaPredicted RBP7.36□□□□□ -1.23
ITGB1-217ENST00000494395 TMEM155Q4W5P6 130 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 PRAMEF6Q5VXH4 476 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 WDR86Q86TI4 376 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 MOGAT3Q86VF5 341 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 LRRC28Q86X40 367 aaPredicted RBP7.36□□□□□ -1.23
ITGB1-217ENST00000494395 PACRGLQ8N7B6 248 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 RAB1CQ92928 201 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 ITFG2Q969R8 447 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 CLUHP3Q96NS8 147 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 TBX5Q99593 518 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 ZNF649Q9BS31 505 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 FGF23Q9GZV9 251 aaPredicted RBP7.36□□□□□ -1.23
ITGB1-217ENST00000494395 PBOV1Q9GZY1 135 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 ZNF665Q9H7R5 613 aa7.36□□□□□ -1.23
ITGB1-217ENST00000494395 MOB1AQ9H8S9 216 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms