RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 AVPI1Q5T686 147 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 PRAMEF6Q5VXH4 476 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 IZUMO2Q6UXV1 221 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 MOGAT3Q86VF5 341 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 EGFL6Q8IUX8 553 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 SYS1Q8N2H4 156 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 FTMTQ8N4E7 242 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 PLPP7Q8NBV4 271 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 SEMA6DQ8NFY4 1073 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 OR14K1Q8NGZ2 314 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 PIGCQ92535 297 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 ITFG2Q969R8 447 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 PELI1Q96FA3 418 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 MRPL48Q96GC5 212 aaKnown RBP11.43□□□□□ -0.58
COL1A1-208ENST00000494334 MYCBPQ99417 103 aaPredicted RBP11.43□□□□□ -0.58
COL1A1-208ENST00000494334 PAPOLGQ9BWT3 736 aaKnown RBP11.43□□□□□ -0.58
COL1A1-208ENST00000494334 PLCXD1Q9NUJ7 323 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 WIPI2Q9Y4P8 454 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 ZNF816-ZNF321PA0A0X1KG74 233 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 IRGMA1A4Y4 181 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 ZNF850A8MQ14 1090 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 XPNPEP2O43895 674 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 MTRF1O75570 445 aaKnown RBP11.42□□□□□ -0.58
COL1A1-208ENST00000494334 DHRS3O75911 302 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 CCL1P22362 96 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 GNALP38405 381 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 KIR3DL2P43630 455 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 ETV1P50549 477 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 CHN2P52757 468 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 NANOS3P60323 173 aaKnown RBP11.42□□□□□ -0.58
COL1A1-208ENST00000494334 KRTAP1-1Q07627 177 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 RIPPLY1Q0D2K3 151 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 PRDX4Q13162 271 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 MPPED2Q15777 294 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 TMEM249Q2WGJ8 235 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 FDX2Q6P4F2 183 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 CLEC9AQ6UXN8 241 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 Q6ZSR3 168 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 DOK3Q7L591 496 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 BPIFB6Q8NFQ5 453 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 OR2G2Q8NGZ5 317 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 OR8S1Q8NH09 359 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 RAB1CQ92928 201 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 ERGIC1Q969X5 290 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 ITPKCQ96DU7 683 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 TIMD4Q96H15 378 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 TMEM80Q96HE8 168 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 NARFLQ9H6Q4 476 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 FRRS1LQ9P0K9 344 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 DIMT1Q9UNQ2 313 aaKnown RBP11.42□□□□□ -0.58
COL1A1-208ENST00000494334 PIGLQ9Y2B2 252 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 MPC1Q9Y5U8 109 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 NPTNQ9Y639 398 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 V9GYS6 101 aa11.42□□□□□ -0.58
COL1A1-208ENST00000494334 FLNAP21333 2647 aaKnown RBP11.41□□□□□ -0.58
COL1A1-208ENST00000494334 MAP1AP78559 2803 aaPredicted RBP11.41□□□□□ -0.58
COL1A1-208ENST00000494334 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.41□□□□□ -0.58
COL1A1-208ENST00000494334 TMEM178BH3BS89 294 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 IFNL4K9M1U5 179 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 CYB5R3P00387 301 aaPredicted RBP11.41□□□□□ -0.58
COL1A1-208ENST00000494334 HTR1AP08908 422 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 PIPP12273 146 aaPredicted RBP11.41□□□□□ -0.58
COL1A1-208ENST00000494334 MYF6P23409 242 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 IL2RGP31785 369 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 VHLP40337 213 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 MZT1Q08AG7 82 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 ZNF181Q2M3W8 571 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 C6orf141Q5SZD1 244 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 ZBTB37Q5TC79 503 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 WDR86Q86TI4 376 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 RDH10Q8IZV5 341 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 CLDND2Q8NHS1 167 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 Q8TCH9 128 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 ANKRD60Q9BZ19 345 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 FGF23Q9GZV9 251 aaPredicted RBP11.41□□□□□ -0.58
COL1A1-208ENST00000494334 UFSP2Q9NUQ7 469 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 C14orf119Q9NWQ9 140 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 CNOT2Q9NZN8 540 aaKnown RBP11.41□□□□□ -0.58
COL1A1-208ENST00000494334 PSORS1C1Q9UIG5 152 aa11.41□□□□□ -0.58
COL1A1-208ENST00000494334 EXOSC1Q9Y3B2 195 aaKnown RBP11.41□□□□□ -0.58
COL1A1-208ENST00000494334 A0A1B0GVI7 797 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 EFCAB10A6NFE3 127 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 ANXA2P2A6NMY6 339 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 E9PI62 339 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 H3BSH0 61 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 SYT7O43581 403 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 IGHV2-70P01814 119 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 GRPP07492 148 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 IGHV4-31P0DP07 118 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 FAHP16930 419 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 HSPA13P48723 471 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 CCR9P51686 369 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 ST3GAL4Q11206 333 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 ALKBH1Q13686 389 aaKnown RBP11.4□□□□□ -0.58
COL1A1-208ENST00000494334 OR2G6Q5TZ20 316 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 Q71RC1 249 aaPredicted RBP11.4□□□□□ -0.58
COL1A1-208ENST00000494334 PEG10Q86TG7 708 aaKnown RBP11.4□□□□□ -0.58
COL1A1-208ENST00000494334 C11orf53Q8IXP5 236 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 ZDHHC23Q8IYP9 409 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 OR1M1Q8NGA1 313 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms