RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CBR4Q8N4T8 237 aa18.93■□□□□ 0.62
SNIP1-203ENST00000493916 OR51G2Q8NGK0 314 aa18.93■□□□□ 0.62
SNIP1-203ENST00000493916 TRUB1Q8WWH5 349 aaKnown RBP18.93■□□□□ 0.62
SNIP1-203ENST00000493916 ITPKCQ96DU7 683 aa18.93■□□□□ 0.62
SNIP1-203ENST00000493916 NEIL1Q96FI4 390 aaPredicted RBP18.93■□□□□ 0.62
SNIP1-203ENST00000493916 HRASLS5Q96KN8 279 aa18.93■□□□□ 0.62
SNIP1-203ENST00000493916 TTTY10Q9BZA0 68 aa18.93■□□□□ 0.62
SNIP1-203ENST00000493916 PBOV1Q9GZY1 135 aa18.93■□□□□ 0.62
SNIP1-203ENST00000493916 MOB1AQ9H8S9 216 aa18.93■□□□□ 0.62
SNIP1-203ENST00000493916 NUFIP1Q9UHK0 495 aaKnown RBP18.93■□□□□ 0.62
SNIP1-203ENST00000493916 COL6A5A8TX70 2615 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 LOC105371242A0A075B767 164 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 A6NLC8 198 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 SRSF10O75494 262 aaKnown RBP18.92■□□□□ 0.62
SNIP1-203ENST00000493916 IGLV3-1P01715 115 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 KCNJ8Q15842 424 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 NLRC3Q7RTR2 1065 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 WDR86Q86TI4 376 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 GALNT4Q8N4A0 578 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 OR1M1Q8NGA1 313 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 OR8B3Q8NGG8 313 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 FAM81AQ8TBF8 368 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 RFKQ969G6 155 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 OR8B2Q96RD0 313 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 SSBP3Q9BWW4 388 aaPredicted RBP18.92■□□□□ 0.62
SNIP1-203ENST00000493916 TLNRD1Q9H1K6 362 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 METTL17Q9H7H0 456 aaPredicted RBP18.92■□□□□ 0.62
SNIP1-203ENST00000493916 TRIM36Q9NQ86 728 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 OR5V1Q9UGF6 321 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 OPN4Q9UHM6 478 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 METRNQ9UJH8 293 aa18.92■□□□□ 0.62
SNIP1-203ENST00000493916 ANXA2P2A6NMY6 339 aa18.91■□□□□ 0.62
SNIP1-203ENST00000493916 TRAPPC2LH3BP13 241 aa18.91■□□□□ 0.62
SNIP1-203ENST00000493916 LGALS8O00214 317 aa18.91■□□□□ 0.62
SNIP1-203ENST00000493916 ATP6V1B1P15313 513 aa18.91■□□□□ 0.62
SNIP1-203ENST00000493916 ZNF12P17014 697 aa18.91■□□□□ 0.62
SNIP1-203ENST00000493916 MFGE8Q08431 387 aaPredicted RBP18.91■□□□□ 0.62
SNIP1-203ENST00000493916 TMEM158Q8WZ71 300 aa18.91■□□□□ 0.62
SNIP1-203ENST00000493916 EME1Q96AY2 570 aa18.91■□□□□ 0.62
SNIP1-203ENST00000493916 APOL4Q9BPW4 351 aa18.91■□□□□ 0.62
SNIP1-203ENST00000493916 MICU1Q9BPX6 476 aa18.91■□□□□ 0.62
SNIP1-203ENST00000493916 C9orf16Q9BUW7 83 aa18.91■□□□□ 0.62
SNIP1-203ENST00000493916 C7orf69Q9H7B7 122 aa18.91■□□□□ 0.62
SNIP1-203ENST00000493916 PPP1R3EQ9H7J1 279 aa18.91■□□□□ 0.62
SNIP1-203ENST00000493916 MMP26Q9NRE1 261 aa18.91■□□□□ 0.62
SNIP1-203ENST00000493916 IMPAD1Q9NX62 359 aa18.91■□□□□ 0.62
SNIP1-203ENST00000493916 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.91■□□□□ 0.62
SNIP1-203ENST00000493916 LHBP01229 141 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 OR2T7P0C7T2 308 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 MAP2K3P46734 347 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 HOXA4Q00056 320 aaPredicted RBP18.9■□□□□ 0.62
SNIP1-203ENST00000493916 ZNF154Q13106 437 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 PRDX4Q13162 271 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 SLC25A30Q5SVS4 291 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 ZNF826PQ6ZT77 177 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 C11orf53Q8IXP5 236 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 PQLC1Q8N2U9 271 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 GCSAMQ8N6F7 178 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 C19orf18Q8NEA5 215 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 DEFB108BQ8NET1 73 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 OR2T27Q8NH04 317 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 OR5P3Q8WZ94 311 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 RTL8AQ9BWD3 113 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 RNPEPL1Q9HAU8 725 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 MRM2Q9UI43 246 aaKnown RBP18.9■□□□□ 0.62
SNIP1-203ENST00000493916 INSIG2Q9Y5U4 225 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 R4GMQ9 66 aa18.9■□□□□ 0.62
SNIP1-203ENST00000493916 TRAV38-1A0A0B4J264 116 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 ZNF816-ZNF321PA0A0X1KG74 233 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 hCG_1807616A0A1W2PRN6 198 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 OOEPA6NGQ2 149 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 TMEM210A6NLX4 147 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 ZNF850A8MQ14 1090 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 RNF212BA8MTL3 300 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 FSHBP01225 129 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 CD80P33681 288 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 PSMB10P40306 273 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 PITPNBP48739 271 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 SNRPGP62308 76 aaKnown RBP18.89■□□□□ 0.61
SNIP1-203ENST00000493916 GNB2P62879 340 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 PAX2Q02962 417 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 SSX6Q7RTT6 188 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 NANPQ8TBE9 248 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 OR51E1Q8TCB6 317 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 MBOAT4Q96T53 435 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 GPR84Q9NQS5 396 aa18.89■□□□□ 0.61
SNIP1-203ENST00000493916 A0A1W2PQL4 384 aaPredicted RBP18.88■□□□□ 0.61
SNIP1-203ENST00000493916 C3orf80F5H4A9 247 aa18.88■□□□□ 0.61
SNIP1-203ENST00000493916 LOC110117498-PIK3R3F6TDL0 507 aa18.88■□□□□ 0.61
SNIP1-203ENST00000493916 MAGEB4O15481 346 aaPredicted RBP18.88■□□□□ 0.61
SNIP1-203ENST00000493916 NDUFA2O43678 99 aa18.88■□□□□ 0.61
SNIP1-203ENST00000493916 TCF21O43680 179 aa18.88■□□□□ 0.61
SNIP1-203ENST00000493916 TTRP02766 147 aa18.88■□□□□ 0.61
SNIP1-203ENST00000493916 CFHR2P36980 270 aa18.88■□□□□ 0.61
SNIP1-203ENST00000493916 CSNK2BP67870 215 aa18.88■□□□□ 0.61
SNIP1-203ENST00000493916 ZIK1Q3SY52 487 aaPredicted RBP18.88■□□□□ 0.61
SNIP1-203ENST00000493916 ZBTB37Q5TC79 503 aa18.88■□□□□ 0.61
SNIP1-203ENST00000493916 TEX36Q5VZQ5 186 aa18.88■□□□□ 0.61
SNIP1-203ENST00000493916 SFRP4Q6FHJ7 346 aaPredicted RBP18.88■□□□□ 0.61
SNIP1-203ENST00000493916 LYPD2Q6UXB3 125 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms