RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 SLC25A19Q9HC21 320 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 MRPL15Q9P015 296 aaKnown RBP8.89□□□□□ -0.99
COL6A3-214ENST00000493608 ZNF69Q9UC07 566 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 LRCH1Q9Y2L9 728 aa8.89□□□□□ -0.99
COL6A3-214ENST00000493608 SOX21Q9Y651 276 aaPredicted RBP8.89□□□□□ -0.99
COL6A3-214ENST00000493608 IGHV3OR15-7A0A075B7D8 119 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.88□□□□□ -0.99
COL6A3-214ENST00000493608 hCG_38984A0A1B0GV85 526 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 CCDC182A6NF36 153 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 PRODHO43272 600 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 PRKYO43930 277 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 APOC1P02654 83 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 GYPAP02724 150 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 SLC2A5P22732 501 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 FPR2P25090 351 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 EPHA2P29317 976 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 DDOSTP39656 456 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 HILS1P60008 231 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 CSNK2BP67870 215 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 ELF3P78545 371 aaPredicted RBP8.88□□□□□ -0.99
COL6A3-214ENST00000493608 PAX2Q02962 417 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 PAX8Q06710 450 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 SLC35D3Q5M8T2 416 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 FAHD1Q6P587 224 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 ZNF841Q6ZN19 808 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 NLRC3Q7RTR2 1065 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 WDR86Q86TI4 376 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 ZDHHC13Q8IUH4 622 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 C11orf53Q8IXP5 236 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 SIGLECL1Q8N7X8 197 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 OR52H1Q8NGJ2 320 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 RAB40AQ8WXH6 277 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 LRTOMTQ8WZ04 291 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 NRBF2Q96F24 287 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 LYZL4Q96KX0 146 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 TECTBQ96PL2 329 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 DUX5Q96PT3 197 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 TEAD3Q99594 435 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 NUDT16L1Q9BRJ7 211 aaKnown RBP8.88□□□□□ -0.99
COL6A3-214ENST00000493608 MRI1Q9BV20 369 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 SUCNR1Q9BXA5 334 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 TEX12Q9BXU0 123 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 OPA3Q9H6K4 179 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 SP140LQ9H930 580 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 ESM1Q9NQ30 184 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 KRT84Q9NSB2 600 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 CTSZQ9UBR2 303 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 CLN8Q9UBY8 286 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 LAMP5Q9UJQ1 280 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 NUP50Q9UKX7 468 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 NOP16Q9Y3C1 178 aaKnown RBP8.88□□□□□ -0.99
COL6A3-214ENST00000493608 RHBDD3Q9Y3P4 386 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 LRP12Q9Y561 859 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 AP4S1Q9Y587 144 aa8.88□□□□□ -0.99
COL6A3-214ENST00000493608 IGHV2-70DA0A0C4DH43 119 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 ZNF850A8MQ14 1090 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 G3V2T6 193 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 LGALS8O00214 317 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 ADAM20O43506 726 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 PTBP3O95758 552 aaKnown RBP8.87□□□□□ -0.99
COL6A3-214ENST00000493608 IGHV4-38-2P0DP08 117 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 EGR1P18146 543 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 ALOX5APP20292 161 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 ACKR3P25106 362 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 PSMB10P40306 273 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 RASSF2P50749 326 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 GMFBP60983 142 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 ACTG1P63261 375 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 ATP6AP1Q15904 470 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 DMRTC1Q5HYR2 192 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 C1orf146Q5VVC0 180 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 WDR25Q64LD2 544 aaPredicted RBP8.87□□□□□ -0.99
COL6A3-214ENST00000493608 BTNL3Q6UXE8 466 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 DCDC5Q6ZRR9 648 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 USP43Q70EL4 1123 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 KRT77Q7Z794 578 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 GCSAMQ8N6F7 178 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 TCEANCQ8N8B7 351 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 ZDHHC22Q8N966 263 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 SPERTQ8NA61 448 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 OR8B12Q8NGG6 310 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 PIGCQ92535 297 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 PPP1R14AQ96A00 147 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 SEH1LQ96EE3 360 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 PAPOLGQ9BWT3 736 aaKnown RBP8.87□□□□□ -0.99
COL6A3-214ENST00000493608 SEMA6AQ9H2E6 1030 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 SMURF1Q9HCE7 757 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 C14orf119Q9NWQ9 140 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 COPS3Q9UNS2 423 aa8.87□□□□□ -0.99
COL6A3-214ENST00000493608 KIR2DS1A0A191URI9 304 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 OOEPA6NGQ2 149 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 PRR32B1ATL7 298 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 C22orf46C9J442 243 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 TRIM77I1YAP6 450 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 TNFRSF13BO14836 293 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-214ENST00000493608 MAGEB4O15481 346 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-214ENST00000493608 FCN3O75636 299 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 ATP5HO75947 161 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 FSTL3O95633 263 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 LHBP01229 141 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms