RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 GSK3AP49840 483 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 ZNF121P58317 390 aaPredicted RBP13.73□□□□□ -0.21
PTPRU-208ENST00000493601 ARF6P62330 175 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 GK3PQ14409 553 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 GFOD2Q3B7J2 385 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 CDONQ4KMG0 1287 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 OLFML2AQ68BL7 652 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 WDR82Q6UXN9 313 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 CD300LDQ6UXZ3 194 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 FAM57BQ71RH2 274 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 SHFQ7M4L6 423 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 PRSS45Q7RTY3 260 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 SLC36A1Q7Z2H8 476 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 WDR86Q86TI4 376 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 OR10G2Q8NGC3 310 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 DYRK2Q92630 601 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 SGK3Q96BR1 496 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 C12orf43Q96C57 262 aaKnown RBP13.73□□□□□ -0.21
PTPRU-208ENST00000493601 RGCCQ9H4X1 137 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 DNAJC27Q9NZQ0 273 aa13.73□□□□□ -0.21
PTPRU-208ENST00000493601 PRPF19Q9UMS4 504 aaKnown RBP13.73□□□□□ -0.21
PTPRU-208ENST00000493601 FAM183AA6NL82 134 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 ANXA2P2A6NMY6 339 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 B2RBV5 119 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 OPRL1P41146 370 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 CSNK2BP67870 215 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 RELBQ01201 579 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 IL5RAQ01344 420 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 POU4F2Q12837 409 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 WDR38Q5JTN6 314 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 BRICD5Q6PL45 260 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 VMO1Q7Z5L0 202 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 LDLRAD3Q86YD5 345 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 C11orf53Q8IXP5 236 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 CMTM4Q8IZR5 234 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 KIR3DL3Q8N743 410 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 OTULINQ96BN8 352 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 MICU1Q9BPX6 476 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 TLNRD1Q9H1K6 362 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 CNTD2Q9H8S5 307 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 MED20Q9H944 212 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 ABCB9Q9NP78 766 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 ONECUT1Q9UBC0 465 aa13.72□□□□□ -0.21
PTPRU-208ENST00000493601 A0A0U1RQK1 487 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 CLPSL1A2RUU4 121 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 ARRDC5A6NEK1 342 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 H3BN98 237 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 GPR37O15354 613 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 GLCEO94923 617 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 H2BFMP0C1H6 154 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 RAP2AP10114 183 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 TRIM25Q14258 630 aaKnown RBP13.71□□□□□ -0.21
PTPRU-208ENST00000493601 KLHL12Q53G59 568 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 GALNT4Q8N4A0 578 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 IQCF1Q8N6M8 205 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 ITPKCQ96DU7 683 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 PGAM5Q96HS1 289 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 DMRTB1Q96MA1 342 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 CCL13Q99616 98 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 NIPSNAP1Q9BPW8 284 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 RTL8AQ9BWD3 113 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 BRD7Q9NPI1 651 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 RHBDD3Q9Y3P4 386 aa13.71□□□□□ -0.21
PTPRU-208ENST00000493601 VWFP04275 2813 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 A0A1B0GW55 424 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 NKX6-3A6NJ46 265 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 TMEM210A6NLX4 147 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.7□□□□□ -0.22
PTPRU-208ENST00000493601 NDUFB3O43676 98 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 GPR137BO60478 399 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 IGHV4-59P01825 116 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 DUX4L2P0CJ85 424 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 DUX4L3P0CJ86 424 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 DUX4L4P0CJ87 422 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 DUX4L5P0CJ88 424 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 DUX4L6P0CJ89 424 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 DUX4L7P0CJ90 424 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 GYS2P54840 703 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 OCLNQ16625 522 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 LRRC10Q5BKY1 277 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 DUX4L9Q6RFH8 374 aaPredicted RBP13.7□□□□□ -0.22
PTPRU-208ENST00000493601 METAP1DQ6UB28 335 aaPredicted RBP13.7□□□□□ -0.22
PTPRU-208ENST00000493601 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.7□□□□□ -0.22
PTPRU-208ENST00000493601 TIGD4Q8IY51 512 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 FAM216BQ8N7L0 139 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 ZNF454Q8N9F8 522 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 LY6G5BQ8NDX9 201 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 GIPC3Q8TF64 312 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 LRGUKQ96M69 825 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 AMELYQ99218 206 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 FEVQ99581 238 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 CITED1Q99966 193 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 DPAGT1Q9H3H5 408 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 DUX4Q9UBX2 424 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 ZNF391Q9UJN7 358 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 CAB39Q9Y376 341 aaPredicted RBP13.7□□□□□ -0.22
PTPRU-208ENST00000493601 FAM96BQ9Y3D0 163 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 MPC1Q9Y5U8 109 aa13.7□□□□□ -0.22
PTPRU-208ENST00000493601 ACOT8O14734 319 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 CDIPTO14735 213 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms