RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 OR7D2Q96RA2 312 aa6.14□□□□□ -1.43
VPS13B-205ENST00000493587 SEMA3CQ99985 751 aa6.14□□□□□ -1.43
VPS13B-205ENST00000493587 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.14□□□□□ -1.43
VPS13B-205ENST00000493587 OR5AC2Q9NZP5 309 aa6.14□□□□□ -1.43
VPS13B-205ENST00000493587 FOXD3Q9UJU5 478 aaPredicted RBP6.14□□□□□ -1.43
VPS13B-205ENST00000493587 EYSQ5T1H1 3165 aa6.14□□□□□ -1.43
VPS13B-205ENST00000493587 TRAV30A0A087WSZ9 112 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 TRAV39A0A0B4J263 110 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 OR4C45A6NMZ5 311 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 GJE1A6NN92 205 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 NUDT21O43809 227 aaKnown RBP6.13□□□□□ -1.43
VPS13B-205ENST00000493587 FGF17O60258 216 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 JTBO76095 146 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 SLCO2B1O94956 709 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 NDUFB8O95169 186 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 OR6A2O95222 327 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 EOMESO95936 686 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 CXCL10P02778 98 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 ACRP10323 421 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 HOXB2P14652 356 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 MC4RP32245 332 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 CEBPDP49716 269 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-205ENST00000493587 TMEM33P57088 247 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 RAB38P57729 211 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 ERVS71-1P61550 626 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 RAB31Q13636 194 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 SLC17A1Q14916 467 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 CCSMST1Q4G0I0 132 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 TMEM182Q6ZP80 229 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-205ENST00000493587 MED25Q71SY5 747 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 SPRED2Q7Z698 418 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 SPACA9Q96E40 222 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-205ENST00000493587 CST11Q9H112 138 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 ZBP1Q9H171 429 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 ZMAT3Q9HA38 289 aaKnown RBP6.13□□□□□ -1.43
VPS13B-205ENST00000493587 WSB2Q9NYS7 404 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-205ENST00000493587 TBX21Q9UL17 535 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 IGHV2-70DA0A0C4DH43 119 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 A0A1B0GU03 582 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 ATXN7O15265 892 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-205ENST00000493587 IRAK2O43187 625 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 IGSF6O95976 241 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 F11P03951 625 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 CTSDP07339 412 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-205ENST00000493587 FBXO45P0C2W1 286 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 CR2P20023 1033 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 PPP1CCP36873 323 aaKnown RBP6.13□□□□□ -1.43
VPS13B-205ENST00000493587 PBX2P40425 430 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 PRLHRP49683 370 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 RAB9AP51151 201 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 PNLIPRP1P54315 467 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 ARF6P62330 175 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 SLC25A30Q5SVS4 291 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 FRG2Q64ET8 278 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 FDX2Q6P4F2 183 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 SLC25A26Q70HW3 274 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 TMEM150AQ86TG1 271 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 LINC00471Q8N535 108 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 OR52R1Q8NGF1 315 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 OR52L1Q8NGH7 329 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 OR1N2Q8NGR9 330 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 SCAMP5Q8TAC9 235 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 NKD1Q969G9 470 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 FRG2BQ96QU4 278 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 TRIB3Q96RU7 358 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 GPA33Q99795 319 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 PRRT1Q99946 306 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 SLC46A2Q9BY10 475 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 SAMD10Q9BYL1 202 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 ADAP2Q9NPF8 381 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 VPS29Q9UBQ0 182 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 WSB1Q9Y6I7 421 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 TAAR5O14804 337 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 ZNF749O43361 778 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 ARAFP10398 606 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 PF4V1P10720 104 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 HOXB9P17482 250 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-205ENST00000493587 EPHA8P29322 1005 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-205ENST00000493587 APOBEC3AP31941 199 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-205ENST00000493587 FCGR2CP31995 323 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 ARR3P36575 388 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 RAB11AP62491 216 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 ZNF92Q03936 586 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 AMZ1Q400G9 498 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 LRRC73Q5JTD7 316 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 DCST2Q5T1A1 773 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 FIGLAQ6QHK4 219 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 TMEM144Q7Z5S9 345 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 DND1Q8IYX4 353 aaKnown RBP6.13□□□□□ -1.43
VPS13B-205ENST00000493587 PAQR4Q8N4S7 273 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-205ENST00000493587 TTC9BQ8N6N2 239 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 IL22RA1Q8N6P7 574 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 ACOT4Q8N9L9 421 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 ZNF784Q8NCA9 323 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-205ENST00000493587 LFNGQ8NES3 379 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 OR2T33Q8NG76 320 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 OR4D5Q8NGN0 318 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 CPT1CQ8TCG5 803 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 MIB2Q96AX9 1013 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 MACROD1Q9BQ69 325 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms