RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 GALNT4Q8N4A0 578 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 OR2AJ1Q8NGZ0 328 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 C8orf46Q8TAG6 207 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 LHX4Q969G2 390 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 UTP4Q969X6 686 aaKnown RBP6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 SPSB4Q96A44 273 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 MCUR1Q96AQ8 359 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 C12orf43Q96C57 262 aaKnown RBP6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 ZNF799Q96GE5 643 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 ADAT1Q9BUB4 502 aaKnown RBP6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 TSSK6Q9BXA6 273 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 CADM1Q9BY67 442 aaKnown RBP6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 C1orf21Q9H246 121 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 RNPEPL1Q9HAU8 725 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 KRCC1Q9NPI7 259 aaPredicted RBP6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 TBC1D23Q9NUY8 699 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 C14orf119Q9NWQ9 140 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 C1orf123Q9NWV4 160 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 ZNRD1Q9P1U0 126 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 FBLN5Q9UBX5 448 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 VPREB3Q9UKI3 123 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 CAB39Q9Y376 341 aaPredicted RBP6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 N6AMT1Q9Y5N5 214 aa6.95□□□□□ -1.3
APOBEC3F-204ENST00000491387 A0A1B0GW55 424 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 ACOT8O14734 319 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 CCNB2O95067 398 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 TFF1P04155 84 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 FBP1P09467 338 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 SPARCP09486 303 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 DUX4L2P0CJ85 424 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 DUX4L3P0CJ86 424 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 DUX4L4P0CJ87 422 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 DUX4L5P0CJ88 424 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 DUX4L6P0CJ89 424 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 DUX4L7P0CJ90 424 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 SPI1P17947 270 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 DDOSTP39656 456 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 SMIM11AP58511 58 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 GUCA2AQ02747 115 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 POU4F2Q12837 409 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 RIPK1Q13546 671 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 PCK2Q16822 640 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 C11orf88Q6PI97 169 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 DUX4L9Q6RFH8 374 aaPredicted RBP6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 ZNF826PQ6ZT77 177 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 RASSF6Q6ZTQ3 369 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 DCXRQ7Z4W1 244 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 WDR86Q86TI4 376 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 SCCPDHQ8NBX0 429 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 PROKR2Q8NFJ6 384 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 OR10G2Q8NGC3 310 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 OR5R1Q8NH85 324 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 TNFRSF14Q92956 283 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 SPTSSAQ969W0 71 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 NMNAT2Q9BZQ4 307 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 DNTTIP1Q9H147 329 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 IL20Q9NYY1 176 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 ZNF319Q9P2F9 582 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 DUX4Q9UBX2 424 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 PRPF19Q9UMS4 504 aaKnown RBP6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 KLHDC2Q9Y2U9 406 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 SAMHD1Q9Y3Z3 626 aaKnown RBP6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 NBEAL2Q6ZNJ1 2754 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 DNAH3Q8TD57 4116 aa6.94□□□□□ -1.3
APOBEC3F-204ENST00000491387 TET2Q6N021 2002 aaPredicted RBP6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 ZNF816-ZNF321PA0A0X1KG74 233 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 GGT3PA6NGU5 568 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 RNASEK-C17orf49H0YIS7 233 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 M0R129 80 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 GYPAP02724 150 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 OPN1MWP04001 364 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 OPN1MW2P0DN77 364 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 OPN1MW3P0DN78 364 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 PRKACGP22612 351 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 GRK5P34947 590 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 TGM4P49221 684 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 HCCSP53701 268 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 TRIM25Q14258 630 aaKnown RBP6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 MICBQ29980 383 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 MICAQ29983 383 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 BEAN1Q3B7T3 259 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 KLHL12Q53G59 568 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 TEX30Q5JUR7 227 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 SAMD5Q5TGI4 173 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 TMEM236Q5W0B7 351 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 DHRS7BQ6IAN0 325 aaPredicted RBP6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 OR2T5Q6IEZ7 315 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 VMO1Q7Z5L0 202 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 DHFR2Q86XF0 187 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 LINC00471Q8N535 108 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 BOLLQ8N9W6 283 aaKnown RBP6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 BBS1Q8NFJ9 593 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 OR52L1Q8NGH7 329 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 OR6K6Q8NGW6 343 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 OR2T29Q8NH02 315 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 CANT1Q8WVQ1 401 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 SLAMF6Q96DU3 332 aa6.93□□□□□ -1.3
APOBEC3F-204ENST00000491387 SEH1LQ96EE3 360 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms