RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 C3orf56Q8N813 242 aa14.94□□□□□ -0.02
HMGN1-219ENST00000491183 OR1M1Q8NGA1 313 aa14.94□□□□□ -0.02
HMGN1-219ENST00000491183 UTP4Q969X6 686 aaKnown RBP14.94□□□□□ -0.02
HMGN1-219ENST00000491183 LYZL4Q96KX0 146 aa14.94□□□□□ -0.02
HMGN1-219ENST00000491183 TECTBQ96PL2 329 aa14.94□□□□□ -0.02
HMGN1-219ENST00000491183 RNPEPL1Q9HAU8 725 aa14.94□□□□□ -0.02
HMGN1-219ENST00000491183 ENSAO43768 121 aaKnown RBP14.93□□□□□ -0.02
HMGN1-219ENST00000491183 TIPRLO75663 272 aa14.93□□□□□ -0.02
HMGN1-219ENST00000491183 HKR1P10072 659 aa14.93□□□□□ -0.02
HMGN1-219ENST00000491183 ACKR3P25106 362 aa14.93□□□□□ -0.02
HMGN1-219ENST00000491183 DAPP51397 102 aa14.93□□□□□ -0.02
HMGN1-219ENST00000491183 CRISP1P54107 249 aa14.93□□□□□ -0.02
HMGN1-219ENST00000491183 ELF3P78545 371 aaPredicted RBP14.93□□□□□ -0.02
HMGN1-219ENST00000491183 APOFQ13790 326 aa14.93□□□□□ -0.02
HMGN1-219ENST00000491183 CD276Q5ZPR3 534 aa14.93□□□□□ -0.02
HMGN1-219ENST00000491183 FAHD1Q6P587 224 aa14.93□□□□□ -0.02
HMGN1-219ENST00000491183 WDR82Q6UXN9 313 aa14.93□□□□□ -0.02
HMGN1-219ENST00000491183 LRRC29Q8WV35 223 aa14.93□□□□□ -0.02
HMGN1-219ENST00000491183 NRBF2Q96F24 287 aa14.93□□□□□ -0.02
HMGN1-219ENST00000491183 RGCCQ9H4X1 137 aa14.93□□□□□ -0.02
HMGN1-219ENST00000491183 TRIM36Q9NQ86 728 aa14.93□□□□□ -0.02
HMGN1-219ENST00000491183 TVP23BQ9NYZ1 205 aa14.93□□□□□ -0.02
HMGN1-219ENST00000491183 MDFIC2A0A1B0GVS7 189 aa14.92□□□□□ -0.02
HMGN1-219ENST00000491183 CCDC182A6NF36 153 aa14.92□□□□□ -0.02
HMGN1-219ENST00000491183 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.92□□□□□ -0.02
HMGN1-219ENST00000491183 RPS7P62081 194 aaKnown RBP14.92□□□□□ -0.02
HMGN1-219ENST00000491183 BNIP1Q12981 228 aa14.92□□□□□ -0.02
HMGN1-219ENST00000491183 SLC9A3R2Q15599 337 aa14.92□□□□□ -0.02
HMGN1-219ENST00000491183 SNAPC1Q16533 368 aa14.92□□□□□ -0.02
HMGN1-219ENST00000491183 BRD3OSQ6XYD6 125 aa14.92□□□□□ -0.02
HMGN1-219ENST00000491183 GALNT4Q8N4A0 578 aa14.92□□□□□ -0.02
HMGN1-219ENST00000491183 CSNK2A3Q8NEV1 391 aa14.92□□□□□ -0.02
HMGN1-219ENST00000491183 OR8B12Q8NGG6 310 aa14.92□□□□□ -0.02
HMGN1-219ENST00000491183 ITPKCQ96DU7 683 aa14.92□□□□□ -0.02
HMGN1-219ENST00000491183 SEH1LQ96EE3 360 aa14.92□□□□□ -0.02
HMGN1-219ENST00000491183 TEAD3Q99594 435 aa14.92□□□□□ -0.02
HMGN1-219ENST00000491183 PAPOLGQ9BWT3 736 aaKnown RBP14.92□□□□□ -0.02
HMGN1-219ENST00000491183 FGF23Q9GZV9 251 aaPredicted RBP14.92□□□□□ -0.02
HMGN1-219ENST00000491183 TLNRD1Q9H1K6 362 aa14.92□□□□□ -0.02
HMGN1-219ENST00000491183 PAPOLBQ9NRJ5 636 aaKnown RBP14.92□□□□□ -0.02
HMGN1-219ENST00000491183 KAAG1Q9UBP8 84 aa14.92□□□□□ -0.02
HMGN1-219ENST00000491183 LRP12Q9Y561 859 aa14.92□□□□□ -0.02
HMGN1-219ENST00000491183 A0A1B0GW55 424 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 ZNF879B4DU55 563 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 DVL1O14640 695 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 LIPFP07098 398 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 SFTPBP07988 381 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 DUX4L2P0CJ85 424 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 DUX4L3P0CJ86 424 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 DUX4L4P0CJ87 422 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 DUX4L5P0CJ88 424 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 DUX4L6P0CJ89 424 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 DUX4L7P0CJ90 424 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 MMP9P14780 707 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 AMY2BP19961 511 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 CFHR2P36980 270 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 GNALP38405 381 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 MTNR1AP48039 350 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 PTGES3Q15185 160 aaKnown RBP14.91□□□□□ -0.02
HMGN1-219ENST00000491183 DUX4L9Q6RFH8 374 aaPredicted RBP14.91□□□□□ -0.02
HMGN1-219ENST00000491183 FGFRL1Q8N441 504 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 DNAJC9Q8WXX5 260 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 TBX15Q96SF7 602 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 PCGF1Q9BSM1 259 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 NIPAL2Q9H841 368 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 DUX4Q9UBX2 424 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 LAMP5Q9UJQ1 280 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 MPC1Q9Y5U8 109 aa14.91□□□□□ -0.02
HMGN1-219ENST00000491183 ZNF850A8MQ14 1090 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 PRR32B1ATL7 298 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 CLDN34H7C241 214 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 PSMD9O00233 223 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 CDIPTO14735 213 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 PRKYO43930 277 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 CST4P01036 141 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 RNASE1P07998 156 aaKnown RBP14.9□□□□□ -0.02
HMGN1-219ENST00000491183 PSMA6P60900 246 aaKnown RBP14.9□□□□□ -0.02
HMGN1-219ENST00000491183 IL5RAQ01344 420 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 PRDX4Q13162 271 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 DEFB112Q30KQ8 113 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 BTN2A1Q7KYR7 527 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 KRT77Q7Z794 578 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 OR5K1Q8NHB7 308 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 OR5P3Q8WZ94 311 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 PIGCQ92535 297 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 WDFY2Q96P53 400 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 CCL13Q99616 98 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 MICU1Q9BPX6 476 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 TEX12Q9BXU0 123 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 YIPF3Q9GZM5 350 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 PRDM13Q9H4Q3 707 aa14.9□□□□□ -0.02
HMGN1-219ENST00000491183 ZMAT3Q9HA38 289 aaKnown RBP14.9□□□□□ -0.02
HMGN1-219ENST00000491183 ANXA2P2A6NMY6 339 aa14.89□□□□□ -0.03
HMGN1-219ENST00000491183 TMPRSS2O15393 492 aa14.89□□□□□ -0.03
HMGN1-219ENST00000491183 MITFO75030 526 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-219ENST00000491183 TOX4O94842 621 aa14.89□□□□□ -0.03
HMGN1-219ENST00000491183 MRPL3P09001 348 aaKnown RBP14.89□□□□□ -0.03
HMGN1-219ENST00000491183 MUC1P15941 1255 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-219ENST00000491183 EFNB1P98172 346 aa14.89□□□□□ -0.03
HMGN1-219ENST00000491183 FOXL1Q12952 345 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms