RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 MPC1Q9Y5U8 109 aa14.57□□□□□ -0.08
SEC13-218ENST00000490283 ACOD1A6NK06 481 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 SLC22A31A6NKX4 558 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 HAX1O00165 279 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 ENSAO43768 121 aaKnown RBP14.56□□□□□ -0.08
SEC13-218ENST00000490283 PRKYO43930 277 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 ZNF254O75437 659 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 PPIAL4GP0DN37 164 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 PSMB10P40306 273 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 ACTR3P61158 418 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 PAX8Q06710 450 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 ZNF829Q3KNS6 432 aaPredicted RBP14.56□□□□□ -0.08
SEC13-218ENST00000490283 SLX4IPQ5VYV7 408 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 KDM4DQ6B0I6 523 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 ZNF826PQ6ZT77 177 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 AMIGO2Q86SJ2 522 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 GID4Q8IVV7 300 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 TCEANCQ8N8B7 351 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 OR1M1Q8NGA1 313 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 OR8B12Q8NGG6 310 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 LRTOMTQ8WZ04 291 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 DUS3LQ96G46 650 aaKnown RBP14.56□□□□□ -0.08
SEC13-218ENST00000490283 MS4A7Q9GZW8 240 aaPredicted RBP14.56□□□□□ -0.08
SEC13-218ENST00000490283 ZNF319Q9P2F9 582 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 IKZF2Q9UKS7 526 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 RHBDD3Q9Y3P4 386 aa14.56□□□□□ -0.08
SEC13-218ENST00000490283 KIR2DS1A0A191URI9 304 aa14.55□□□□□ -0.08
SEC13-218ENST00000490283 TMEM269A0A1B0GVZ9 245 aa14.55□□□□□ -0.08
SEC13-218ENST00000490283 CCDC182A6NF36 153 aa14.55□□□□□ -0.08
SEC13-218ENST00000490283 ZAR1LA6NP61 321 aa14.55□□□□□ -0.08
SEC13-218ENST00000490283 MITFO75030 526 aaPredicted RBP14.55□□□□□ -0.08
SEC13-218ENST00000490283 RIDAP52758 137 aaKnown RBP14.55□□□□□ -0.08
SEC13-218ENST00000490283 HCCSP53701 268 aa14.55□□□□□ -0.08
SEC13-218ENST00000490283 PRDX4Q13162 271 aa14.55□□□□□ -0.08
SEC13-218ENST00000490283 MICBQ29980 383 aa14.55□□□□□ -0.08
SEC13-218ENST00000490283 NXNL2Q5VZ03 156 aa14.55□□□□□ -0.08
SEC13-218ENST00000490283 C12orf54Q6X4T0 127 aa14.55□□□□□ -0.08
SEC13-218ENST00000490283 KCTD8Q6ZWB6 473 aa14.55□□□□□ -0.08
SEC13-218ENST00000490283 MEPCEQ7L2J0 689 aaKnown RBP14.55□□□□□ -0.08
SEC13-218ENST00000490283 GALNT4Q8N4A0 578 aa14.55□□□□□ -0.08
SEC13-218ENST00000490283 GCSAMQ8N6F7 178 aa14.55□□□□□ -0.08
SEC13-218ENST00000490283 TMEM163Q8TC26 289 aa14.55□□□□□ -0.08
SEC13-218ENST00000490283 LRRC29Q8WV35 223 aa14.55□□□□□ -0.08
SEC13-218ENST00000490283 ITFG2Q969R8 447 aa14.55□□□□□ -0.08
SEC13-218ENST00000490283 MNTQ99583 582 aa14.55□□□□□ -0.08
SEC13-218ENST00000490283 TMEM210A6NLX4 147 aa14.54□□□□□ -0.08
SEC13-218ENST00000490283 ZNF850A8MQ14 1090 aa14.54□□□□□ -0.08
SEC13-218ENST00000490283 PSMD9O00233 223 aa14.54□□□□□ -0.08
SEC13-218ENST00000490283 CST4P01036 141 aa14.54□□□□□ -0.08
SEC13-218ENST00000490283 GYPAP02724 150 aa14.54□□□□□ -0.08
SEC13-218ENST00000490283 DCTDP32321 178 aa14.54□□□□□ -0.08
SEC13-218ENST00000490283 MAP2K3P46734 347 aa14.54□□□□□ -0.08
SEC13-218ENST00000490283 PAX2Q02962 417 aa14.54□□□□□ -0.08
SEC13-218ENST00000490283 CCDC121Q6ZUS5 278 aa14.54□□□□□ -0.08
SEC13-218ENST00000490283 ZNF679Q8IYX0 411 aa14.54□□□□□ -0.08
SEC13-218ENST00000490283 FAM216AQ8WUB2 273 aa14.54□□□□□ -0.08
SEC13-218ENST00000490283 PIGCQ92535 297 aa14.54□□□□□ -0.08
SEC13-218ENST00000490283 CENPNQ96H22 339 aaPredicted RBP14.54□□□□□ -0.08
SEC13-218ENST00000490283 OR8B4Q96RC9 309 aa14.54□□□□□ -0.08
SEC13-218ENST00000490283 A0A0U1RQV5 110 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 ZNF816-ZNF321PA0A0X1KG74 233 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 ZNF670-ZNF695F2Z2N8 137 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 LIPFP07098 398 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 ATP6V1B1P15313 513 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 MUC1P15941 1255 aaPredicted RBP14.53□□□□□ -0.08
SEC13-218ENST00000490283 MTNR1AP48039 350 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 CSNK2BP67870 215 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 ROM1Q03395 351 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 TEX36Q5VZQ5 186 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 C12orf73Q69YU5 71 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 ZNF841Q6ZN19 808 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 THAP5Q7Z6K1 395 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 SLC35F2Q8IXU6 374 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 ZDHHC23Q8IYP9 409 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 PNLDC1Q8NA58 520 aaKnown RBP14.53□□□□□ -0.08
SEC13-218ENST00000490283 GCDHQ92947 438 aaPredicted RBP14.53□□□□□ -0.08
SEC13-218ENST00000490283 UPRTQ96BW1 309 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 ITPKCQ96DU7 683 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 IL4I1Q96RQ9 567 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 CIB1Q99828 191 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 PKP2Q99959 881 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 OSBPL10Q9BXB5 764 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 TTTY10Q9BZA0 68 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 PBOV1Q9GZY1 135 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 SEMA6AQ9H2E6 1030 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 MOB1AQ9H8S9 216 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 FAM206AQ9NX38 181 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 ZNF69Q9UC07 566 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 GTF2A1LQ9UNN4 478 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 ARHGAP32A7KAX9 2087 aa14.53□□□□□ -0.08
SEC13-218ENST00000490283 TRAV40A0A0B4J280 105 aa14.52□□□□□ -0.09
SEC13-218ENST00000490283 M0R129 80 aa14.52□□□□□ -0.09
SEC13-218ENST00000490283 CDIPTO14735 213 aa14.52□□□□□ -0.09
SEC13-218ENST00000490283 TMPRSS2O15393 492 aa14.52□□□□□ -0.09
SEC13-218ENST00000490283 LHBP01229 141 aa14.52□□□□□ -0.09
SEC13-218ENST00000490283 ACKR3P25106 362 aa14.52□□□□□ -0.09
SEC13-218ENST00000490283 CXCR4P61073 352 aa14.52□□□□□ -0.09
SEC13-218ENST00000490283 FGF12P61328 243 aa14.52□□□□□ -0.09
SEC13-218ENST00000490283 HOXA4Q00056 320 aaPredicted RBP14.52□□□□□ -0.09
SEC13-218ENST00000490283 KLF17Q5JT82 389 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms