RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 PELI1Q96FA3 418 aa15.73■□□□□ 0.11
PTCD3-217ENST00000488801 ALG8Q9BVK2 526 aa15.73■□□□□ 0.11
PTCD3-217ENST00000488801 TMEM106BQ9NUM4 274 aa15.73■□□□□ 0.11
PTCD3-217ENST00000488801 GNG8Q9UK08 70 aa15.73■□□□□ 0.11
PTCD3-217ENST00000488801 SLC22A13Q9Y226 551 aa15.73■□□□□ 0.11
PTCD3-217ENST00000488801 RHBDD3Q9Y3P4 386 aa15.73■□□□□ 0.11
PTCD3-217ENST00000488801 WIPI2Q9Y4P8 454 aa15.73■□□□□ 0.11
PTCD3-217ENST00000488801 LOC100289279A0A1B0GTE1 492 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 DHRS7CA6NNS2 312 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 ANKRD30BLA7E2S9 258 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 IFNL4K9M1U5 179 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 DHRS3O75911 302 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 RPP14O95059 124 aaKnown RBP15.72■□□□□ 0.11
PTCD3-217ENST00000488801 LY6G6DO95868 133 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 PIPP12273 146 aaPredicted RBP15.72■□□□□ 0.11
PTCD3-217ENST00000488801 PMELP40967 661 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 SLC3A1Q07837 685 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 THAP5Q7Z6K1 395 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 WDR86Q86TI4 376 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 SPERTQ8NA61 448 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 CCL17Q92583 94 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 HPS1Q92902 700 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 ERGIC1Q969X5 290 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 VCX3BQ9H321 246 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 PPP1R3EQ9H7J1 279 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 PLCXD1Q9NUJ7 323 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 DIMT1Q9UNQ2 313 aaKnown RBP15.72■□□□□ 0.11
PTCD3-217ENST00000488801 PPP1R3CQ9UQK1 317 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 V9GYS6 101 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 C2CD3Q4AC94 2353 aa15.72■□□□□ 0.11
PTCD3-217ENST00000488801 DSCAML1Q8TD84 2053 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 PPIHO43447 177 aaKnown RBP15.71■□□□□ 0.11
PTCD3-217ENST00000488801 FSTL3O95633 263 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 IGHV2-70P01814 119 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 IGHV4-31P0DP07 118 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 DCKP27707 260 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 IL2RGP31785 369 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 RBMXP38159 391 aaKnown RBP15.71■□□□□ 0.11
PTCD3-217ENST00000488801 MAP2K3P46734 347 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 CHN2P52757 468 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 NANOS3P60323 173 aaKnown RBP15.71■□□□□ 0.11
PTCD3-217ENST00000488801 C6orf52Q5T4I8 152 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 TMEM42Q69YG0 159 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 LHFPL3Q86UP9 236 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 FTMTQ8N4E7 242 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 OR14K1Q8NGZ2 314 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 OR2G2Q8NGZ5 317 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 CLDND2Q8NHS1 167 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 HPSE2Q8WWQ2 592 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 C4orf36Q96KX1 117 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 PAPOLGQ9BWT3 736 aaKnown RBP15.71■□□□□ 0.11
PTCD3-217ENST00000488801 ANKRD60Q9BZ19 345 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 FGF23Q9GZV9 251 aaPredicted RBP15.71■□□□□ 0.11
PTCD3-217ENST00000488801 TLNRD1Q9H1K6 362 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 ABCB9Q9NP78 766 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 FKBP14Q9NWM8 211 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 TREM2Q9NZC2 230 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 RRP15Q9Y3B9 282 aaKnown RBP15.71■□□□□ 0.11
PTCD3-217ENST00000488801 MPC1Q9Y5U8 109 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 NAV3Q8IVL0 2385 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 ZFHX3Q15911 3703 aa15.71■□□□□ 0.11
PTCD3-217ENST00000488801 ZNF816-ZNF321PA0A0X1KG74 233 aa15.7■□□□□ 0.1
PTCD3-217ENST00000488801 IRGMA1A4Y4 181 aa15.7■□□□□ 0.1
PTCD3-217ENST00000488801 LRP5LA4QPB2 252 aa15.7■□□□□ 0.1
PTCD3-217ENST00000488801 TMEM178BH3BS89 294 aa15.7■□□□□ 0.1
PTCD3-217ENST00000488801 CD5LO43866 347 aa15.7■□□□□ 0.1
PTCD3-217ENST00000488801 PSMB10P40306 273 aa15.7■□□□□ 0.1
PTCD3-217ENST00000488801 CCR9P51686 369 aa15.7■□□□□ 0.1
PTCD3-217ENST00000488801 MPPED2Q15777 294 aa15.7■□□□□ 0.1
PTCD3-217ENST00000488801 PRAMEF6Q5VXH4 476 aa15.7■□□□□ 0.1
PTCD3-217ENST00000488801 CLEC9AQ6UXN8 241 aa15.7■□□□□ 0.1
PTCD3-217ENST00000488801 MOGAT3Q86VF5 341 aa15.7■□□□□ 0.1
PTCD3-217ENST00000488801 ZNF420Q8TAQ5 688 aaPredicted RBP15.7■□□□□ 0.1
PTCD3-217ENST00000488801 RPS4Y2Q8TD47 263 aa15.7■□□□□ 0.1
PTCD3-217ENST00000488801 ISG20L2Q9H9L3 353 aaKnown RBP15.7■□□□□ 0.1
PTCD3-217ENST00000488801 CNOT2Q9NZN8 540 aaKnown RBP15.7■□□□□ 0.1
PTCD3-217ENST00000488801 NPTNQ9Y639 398 aa15.7■□□□□ 0.1
PTCD3-217ENST00000488801 NIPBLQ6KC79 2804 aaeCLIP15.69■□□□□ 0.1
PTCD3-217ENST00000488801 P2RY10O00398 339 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 ISG15P05161 165 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 UBCP0CG48 685 aaKnown RBP15.69■□□□□ 0.1
PTCD3-217ENST00000488801 MYF6P23409 242 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 LMO4P61968 165 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 PRDX4Q13162 271 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 FAM76BQ5HYJ3 339 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 AVPI1Q5T686 147 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 IZUMO2Q6UXV1 221 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 DOK3Q7L591 496 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 C11orf53Q8IXP5 236 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 ZNF485Q8NCK3 441 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 SEMA6DQ8NFY4 1073 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 OR5P3Q8WZ94 311 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 GGHQ92820 318 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 MRPL48Q96GC5 212 aaKnown RBP15.69■□□□□ 0.1
PTCD3-217ENST00000488801 FAM71F1Q96KD3 344 aaPredicted RBP15.69■□□□□ 0.1
PTCD3-217ENST00000488801 MYCBPQ99417 103 aaPredicted RBP15.69■□□□□ 0.1
PTCD3-217ENST00000488801 FRRS1LQ9P0K9 344 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 PSORS1C1Q9UIG5 152 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 GTF2A1LQ9UNN4 478 aa15.69■□□□□ 0.1
PTCD3-217ENST00000488801 NF1P21359 2839 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms