RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 DTWD2Q8NBA8 298 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 OR4D10Q8NGI6 311 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 ABHD3Q8WU67 409 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 KCNJ15Q99712 375 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 HS3ST3B1Q9Y662 390 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 THADAQ6YHU6 1953 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 FANCMQ8IYD8 2048 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 IGKV3D-11A0A0A0MRZ8 115 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 ZNF354AO60765 605 aaPredicted RBP11.74□□□□□ -0.53
HMGN1-216ENST00000486741 RAMP1O60894 148 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 AGFG1P52594 562 aaKnown RBP11.74□□□□□ -0.53
HMGN1-216ENST00000486741 GAS1P54826 345 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 RAC1P63000 192 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 CLPPQ16740 277 aaPredicted RBP11.74□□□□□ -0.53
HMGN1-216ENST00000486741 FAM76BQ5HYJ3 339 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 FAM122BQ7Z309 247 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 SUMF1Q8NBK3 374 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 ZNF426Q9BUY5 554 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 MOB1AQ9H8S9 216 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 SCPEP1Q9HB40 452 aa11.74□□□□□ -0.53
HMGN1-216ENST00000486741 NDUFB6O95139 128 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 OMGP23515 440 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 SFRP5Q5T4F7 317 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 FIP1L1Q6UN15 594 aaKnown RBP11.73□□□□□ -0.53
HMGN1-216ENST00000486741 CATSPERDQ86XM0 798 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 ZNF695Q8IW36 515 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 PSMF1Q92530 271 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 RDH5Q92781 318 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 ZFP64Q9NPA5 681 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 DUSP13Q9UII6 198 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 ZFHX2Q9C0A1 2572 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-216ENST00000486741 HLA-DQB1P01920 261 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 GRPP07492 148 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 HNF4GQ14541 408 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 HES3Q5TGS1 186 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 PLXDC2Q6UX71 529 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 DEFB124Q8NES8 71 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 OR11H7Q8NGC8 314 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 GPX7Q96SL4 187 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-216ENST00000486741 DHRS9Q9BPW9 319 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 MRPS18BQ9Y676 258 aaKnown RBP11.73□□□□□ -0.53
HMGN1-216ENST00000486741 PHF3Q92576 2039 aaKnown RBP11.73□□□□□ -0.53
HMGN1-216ENST00000486741 MEX3AA1L020 520 aaKnown RBP11.73□□□□□ -0.53
HMGN1-216ENST00000486741 TO15178 435 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 IAH1Q2TAA2 248 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-216ENST00000486741 GLDNQ6ZMI3 551 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-216ENST00000486741 TMUB2Q71RG4 321 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 OR5M9Q8NGP3 310 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 OR6X1Q8NH79 312 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 ZNF2Q9BSG1 426 aaPredicted RBP11.73□□□□□ -0.53
HMGN1-216ENST00000486741 DNTTIP1Q9H147 329 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 ZNF286AQ9HBT8 521 aa11.73□□□□□ -0.53
HMGN1-216ENST00000486741 A0A0J9YW62 118 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 A0A1W2PP11 408 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 M0R296 226 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 WNT11O96014 354 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 EXOSC2Q13868 293 aaKnown RBP11.72□□□□□ -0.53
HMGN1-216ENST00000486741 NAA40Q86UY6 237 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 FAM219AQ8IW50 185 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 GALNT16Q8N428 558 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 CCDC54Q8NEL0 328 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 OR52H1Q8NGJ2 320 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 OR5L1Q8NGL2 311 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 ELF5Q9UKW6 265 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-216ENST00000486741 CCDC187A0A096LP49 1063 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 IGLV1-36A0A0B4J1U3 117 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 PRR32B1ATL7 298 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 M0R036 132 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 GIPP09681 153 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-216ENST00000486741 RPS4XP62701 263 aaKnown RBP11.72□□□□□ -0.53
HMGN1-216ENST00000486741 ARF1P84077 181 aaKnown RBP11.72□□□□□ -0.53
HMGN1-216ENST00000486741 EFNB1P98172 346 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 CLN3Q13286 438 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 FAM209AQ5JX71 171 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 DEGS2Q6QHC5 323 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 SLC25A38Q96DW6 304 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 PARP12Q9H0J9 701 aaKnown RBP11.72□□□□□ -0.53
HMGN1-216ENST00000486741 HRH4Q9H3N8 390 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 FAM86C1Q9NVL1 165 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 PTTG3PQ9NZH4 202 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 GBF1Q92538 1859 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 TMEM265A0A087WTH1 108 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 IGKV1D-43A0A0B4J1Z2 117 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 ANKRD20A5PA0PJZ0 165 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 OR5H14A6NHG9 310 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 BPNT1O95861 308 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 MST1P26927 711 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 SERPINF1P36955 418 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 CD96P40200 585 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 ZXDAP98168 799 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 PLA1AQ53H76 456 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 FAM74A1Q5RGS3 127 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 FBXW12Q6X9E4 464 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 C6orf201Q7Z4U5 140 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 ZSCAN4Q8NAM6 433 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-216ENST00000486741 TMEM178AQ8NBL3 297 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 UBALD1Q8TB05 177 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 CHST6Q9GZX3 395 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 PRR13Q9NZ81 148 aa11.72□□□□□ -0.53
HMGN1-216ENST00000486741 SOCS1O15524 211 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms