RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PPP1R3EQ9H7J1 279 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 ISG20L2Q9H9L3 353 aaKnown RBP10.02□□□□□ -0.81
HPS4-214ENST00000485842 UFSP2Q9NUQ7 469 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 ZNF816-ZNF321PA0A0X1KG74 233 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 A0A1B0GTI1 187 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 A0A1B0GVI7 797 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 LOC107986453A0A1B0GWG9 222 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 ISPDA4D126 451 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 EFCAB10A6NFE3 127 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 ANXA2P2A6NMY6 339 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 MTRF1O75570 445 aaKnown RBP10.01□□□□□ -0.81
HPS4-214ENST00000485842 DHRS3O75911 302 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 IGLV3-1P01715 115 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 LIMS3P0CW19 117 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 LIMS4P0CW20 117 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 FOSL1P15407 271 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 MYL12AP19105 171 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 MYF6P23409 242 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 CD200P41217 278 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 TMEM33P57088 247 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 SLC3A1Q07837 685 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 LOXL1Q08397 574 aaPredicted RBP10.01□□□□□ -0.81
HPS4-214ENST00000485842 ST3GAL4Q11206 333 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 MAB21L1Q13394 359 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 KLBQ86Z14 1044 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 SYS1Q8N2H4 156 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 KLHL36Q8N4N3 616 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 SEMA6DQ8NFY4 1073 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 OR2G2Q8NGZ5 317 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 TIMD4Q96H15 378 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 TMEM80Q96HE8 168 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 ZNF649Q9BS31 505 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 ANKRD60Q9BZ19 345 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 GCM1Q9NP62 436 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 TMEM106BQ9NUM4 274 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 DIMT1Q9UNQ2 313 aaKnown RBP10.01□□□□□ -0.81
HPS4-214ENST00000485842 PIGLQ9Y2B2 252 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 EXOSC1Q9Y3B2 195 aaKnown RBP10.01□□□□□ -0.81
HPS4-214ENST00000485842 WIPI2Q9Y4P8 454 aa10.01□□□□□ -0.81
HPS4-214ENST00000485842 LRP5LA4QPB2 252 aa10□□□□□ -0.81
HPS4-214ENST00000485842 A6NLC8 198 aa10□□□□□ -0.81
HPS4-214ENST00000485842 SLC1A7O00341 560 aa10□□□□□ -0.81
HPS4-214ENST00000485842 SYT7O43581 403 aa10□□□□□ -0.81
HPS4-214ENST00000485842 GRPP07492 148 aa10□□□□□ -0.81
HPS4-214ENST00000485842 UBCP0CG48 685 aaKnown RBP10□□□□□ -0.81
HPS4-214ENST00000485842 PIPP12273 146 aaPredicted RBP10□□□□□ -0.81
HPS4-214ENST00000485842 ATP6V1B1P15313 513 aa10□□□□□ -0.81
HPS4-214ENST00000485842 CHN2P52757 468 aa10□□□□□ -0.81
HPS4-214ENST00000485842 GBX2P52951 348 aaPredicted RBP10□□□□□ -0.81
HPS4-214ENST00000485842 NANOS3P60323 173 aaKnown RBP10□□□□□ -0.81
HPS4-214ENST00000485842 MZT1Q08AG7 82 aa10□□□□□ -0.81
HPS4-214ENST00000485842 RIPPLY1Q0D2K3 151 aa10□□□□□ -0.81
HPS4-214ENST00000485842 MED21Q13503 144 aa10□□□□□ -0.81
HPS4-214ENST00000485842 C6orf141Q5SZD1 244 aa10□□□□□ -0.81
HPS4-214ENST00000485842 OR2G6Q5TZ20 316 aa10□□□□□ -0.81
HPS4-214ENST00000485842 DOK3Q7L591 496 aa10□□□□□ -0.81
HPS4-214ENST00000485842 PEG10Q86TG7 708 aaKnown RBP10□□□□□ -0.81
HPS4-214ENST00000485842 LURAP1LQ8IV03 231 aa10□□□□□ -0.81
HPS4-214ENST00000485842 ZDHHC23Q8IYP9 409 aa10□□□□□ -0.81
HPS4-214ENST00000485842 RDH10Q8IZV5 341 aa10□□□□□ -0.81
HPS4-214ENST00000485842 STX19Q8N4C7 294 aa10□□□□□ -0.81
HPS4-214ENST00000485842 SPERTQ8NA61 448 aa10□□□□□ -0.81
HPS4-214ENST00000485842 RAB1CQ92928 201 aa10□□□□□ -0.81
HPS4-214ENST00000485842 RNF166Q96A37 237 aaPredicted RBP10□□□□□ -0.81
HPS4-214ENST00000485842 CNBD2Q96M20 576 aa10□□□□□ -0.81
HPS4-214ENST00000485842 JAM3Q9BX67 310 aa10□□□□□ -0.81
HPS4-214ENST00000485842 GSX1Q9H4S2 264 aaPredicted RBP10□□□□□ -0.81
HPS4-214ENST00000485842 PLEKHA1Q9HB21 404 aa10□□□□□ -0.81
HPS4-214ENST00000485842 PLCXD1Q9NUJ7 323 aa10□□□□□ -0.81
HPS4-214ENST00000485842 C14orf119Q9NWQ9 140 aa10□□□□□ -0.81
HPS4-214ENST00000485842 CHCHD3Q9NX63 227 aaKnown RBP10□□□□□ -0.81
HPS4-214ENST00000485842 CNOT2Q9NZN8 540 aaKnown RBP10□□□□□ -0.81
HPS4-214ENST00000485842 FRRS1LQ9P0K9 344 aa10□□□□□ -0.81
HPS4-214ENST00000485842 PSORS1C1Q9UIG5 152 aa10□□□□□ -0.81
HPS4-214ENST00000485842 ENPP5Q9UJA9 477 aa10□□□□□ -0.81
HPS4-214ENST00000485842 MPC1Q9Y5U8 109 aa10□□□□□ -0.81
HPS4-214ENST00000485842 LOC100289279A0A1B0GTE1 492 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 hCG_1807616A0A1W2PRN6 198 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 A6NIN4 97 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 LRRC30A6NM36 301 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 E9PI62 339 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 WNT9BO14905 357 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 CYB5R3P00387 301 aaPredicted RBP9.99□□□□□ -0.81
HPS4-214ENST00000485842 CST4P01036 141 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 CCL1P22362 96 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 GATA4P43694 442 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 ALKBH1Q13686 389 aaKnown RBP9.99□□□□□ -0.81
HPS4-214ENST00000485842 MPPED2Q15777 294 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 TMEM249Q2WGJ8 235 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 DMRTC1Q5HYR2 192 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 CEP78Q5JTW2 689 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 PLCXD3Q63HM9 321 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 FDX2Q6P4F2 183 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 CLEC9AQ6UXN8 241 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 TMPRSS11AQ6ZMR5 421 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 KCTD8Q6ZWB6 473 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 MOB3CQ70IA8 216 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 Q71RC1 249 aaPredicted RBP9.99□□□□□ -0.81
HPS4-214ENST00000485842 WDR86Q86TI4 376 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 BIVMQ86UB2 503 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms