RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 HCCSP53701 268 aa2.34□□□□□ -2.03
SMC4-215ENST00000484799 IFITM3Q01628 133 aa2.34□□□□□ -2.03
SMC4-215ENST00000484799 PSG3Q16557 428 aa2.34□□□□□ -2.03
SMC4-215ENST00000484799 CD300LGQ6UXG3 332 aa2.34□□□□□ -2.03
SMC4-215ENST00000484799 RTL4Q6ZR62 310 aa2.34□□□□□ -2.03
SMC4-215ENST00000484799 CALHM1Q8IU99 346 aa2.34□□□□□ -2.03
SMC4-215ENST00000484799 SLC30A8Q8IWU4 369 aa2.34□□□□□ -2.03
SMC4-215ENST00000484799 TCAIMQ8N3R3 496 aa2.34□□□□□ -2.03
SMC4-215ENST00000484799 OR51A7Q8NH64 312 aa2.34□□□□□ -2.03
SMC4-215ENST00000484799 OR1S1Q8NH92 325 aa2.34□□□□□ -2.03
SMC4-215ENST00000484799 PHF10Q8WUB8 498 aaKnown RBP2.34□□□□□ -2.03
SMC4-215ENST00000484799 C15orf40Q8WUR7 153 aa2.34□□□□□ -2.03
SMC4-215ENST00000484799 TMEM234Q8WY98 164 aa2.34□□□□□ -2.03
SMC4-215ENST00000484799 RERGQ96A58 199 aaPredicted RBP2.34□□□□□ -2.03
SMC4-215ENST00000484799 CCDC124Q96CT7 223 aaKnown RBP2.34□□□□□ -2.03
SMC4-215ENST00000484799 RDH12Q96NR8 316 aa2.34□□□□□ -2.03
SMC4-215ENST00000484799 ZNRD1Q9P1U0 126 aa2.34□□□□□ -2.03
SMC4-215ENST00000484799 EIF4G1Q04637 1599 aaKnown RBP2.34□□□□□ -2.03
SMC4-215ENST00000484799 PCDH11XQ9BZA7 1347 aa2.34□□□□□ -2.04
SMC4-215ENST00000484799 LRP4O75096 1905 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 A0A0A6YYD5 115 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 IGHV2OR16-5A0A0B4J2B6 119 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 IGHV1OR15-9A0A0B4J2B8 117 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 A0A0U1RQV1 116 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 C11orf94C9JXX5 98 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 LINC01619G3V211 115 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 OR5AL1P0C617 328 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 TLX1NBP0CAT3 122 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 THRAP10827 490 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 APLNRP35414 380 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 UBE2E1P51965 193 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 TAS2R46P59540 309 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 DSTNP60981 165 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 ESRRGP62508 458 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 RPL31P62899 125 aaKnown RBP2.33□□□□□ -2.04
SMC4-215ENST00000484799 PAFAH1B2P68402 229 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 SLC35A1P78382 337 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 PPIDQ08752 370 aaKnown RBP2.33□□□□□ -2.04
SMC4-215ENST00000484799 NAB1Q13506 487 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 OR1Q1Q15612 314 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 FAM78AQ5JUQ0 283 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 NCCRP1Q6ZVX7 275 aaPredicted RBP2.33□□□□□ -2.04
SMC4-215ENST00000484799 CDKL3Q8IVW4 592 aaPredicted RBP2.33□□□□□ -2.04
SMC4-215ENST00000484799 FAM86B1Q8N7N1 296 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 LILRB4Q8NHJ6 448 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 CDKL2Q92772 493 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 TMIGD2Q96BF3 282 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 ATP6V1G3Q96LB4 118 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 UBE2E2Q96LR5 201 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 ZNF382Q96SR6 550 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 HINT2Q9BX68 163 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 PORCNQ9H237 461 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 OR51B5Q9H339 312 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 STMN3Q9NZ72 180 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 TBX21Q9UL17 535 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 ACOT9Q9Y305 439 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 SIGLEC9Q9Y336 463 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 RBMX2Q9Y388 322 aaKnown RBP2.33□□□□□ -2.04
SMC4-215ENST00000484799 TMEM14AQ9Y6G1 99 aa2.33□□□□□ -2.04
SMC4-215ENST00000484799 LINC00854A0A1B0GVQ3 168 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 BPY2O14599 106 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 B4GALT5O43286 388 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 CHST10O43529 356 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 REM1O75628 298 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 SMC2O95347 1197 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 NPPAP01160 153 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 IGLV3-19P01714 112 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 PGAM1P18669 254 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 GNRHRP30968 328 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 RPS9P46781 194 aaKnown RBP2.32□□□□□ -2.04
SMC4-215ENST00000484799 GFERP55789 205 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 ATP5J2P56134 94 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 VSNL1P62760 191 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 RPL23P62829 140 aaKnown RBP2.32□□□□□ -2.04
SMC4-215ENST00000484799 CRADDP78560 199 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 PNOCQ13519 176 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 DEFB116Q30KQ4 102 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 MFSD14CQ5VZR4 134 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 BHLHA15Q7RTS1 189 aaPredicted RBP2.32□□□□□ -2.04
SMC4-215ENST00000484799 MDP1Q86V88 176 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 SLC7A5P1Q8MH63 180 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 SYCE1Q8N0S2 351 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 PGAM4Q8N0Y7 254 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 CA13Q8N1Q1 262 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 RNF182Q8N6D2 247 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 OR5W2Q8NH69 310 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 RXFP4Q8TDU9 374 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 TMEM239Q8WW34 195 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 CACNG8Q8WXS5 425 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 PDXPQ96GD0 296 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 SMARCD1Q96GM5 515 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 NDFIP1Q9BT67 221 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 SFXN3Q9BWM7 321 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 OR52A5Q9H2C5 316 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 GOLPH3Q9H4A6 298 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 FBXO8Q9NRD0 319 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 SLC7A11Q9UPY5 501 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 KLF12Q9Y4X4 402 aa2.32□□□□□ -2.04
SMC4-215ENST00000484799 UBIAD1Q9Y5Z9 338 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms