RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 TIMM10BQ9Y5J6 103 aa5.55□□□□□ -1.52
CLK1-212ENST00000482590 USF3Q68DE3 2245 aa5.55□□□□□ -1.52
CLK1-212ENST00000482590 PRR14LQ5THK1 2151 aa5.55□□□□□ -1.52
CLK1-212ENST00000482590 CSPG4Q6UVK1 2322 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 HEATR1Q9H583 2144 aaKnown RBP5.54□□□□□ -1.52
CLK1-212ENST00000482590 EXOC1LA0A1B0GW35 172 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 SLC22A23A1A5C7 686 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 SERINC4A6NH21 518 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 TRIM49D1C9J1S8 452 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 MANBAO00462 879 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 CLOCKO15516 846 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 OR2J3O76001 311 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 TACR3P29371 465 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 MPIP34949 423 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 HTR5AP47898 357 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 NCBP2P52298 156 aaKnown RBP eCLIP5.54□□□□□ -1.528e-8■□□□□ 9.9
CLK1-212ENST00000482590 EFNB2P52799 333 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 CDH12P55289 794 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 CLDN17P56750 224 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 UBE2G2P60604 165 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 PRPS1P60891 318 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 ZNF763Q0D2J5 394 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 CEACAM7Q14002 265 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 PON3Q15166 354 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 IMPG1Q17R60 797 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 OR52W1Q6IF63 320 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 C1orf94Q6P1W5 598 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 FAM122CQ6P4D5 195 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 NPSR1Q6W5P4 371 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 SHFQ7M4L6 423 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 RNF130Q86XS8 419 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 STX12Q86Y82 276 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 PARP8Q8N3A8 854 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 C8orf31Q8N9H6 132 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 STXBP6Q8NFX7 210 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 OR2M3Q8NG83 312 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 OR2AK2Q8NG84 335 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 OR1L6Q8NGR2 347 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 FANK1Q8TC84 345 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 NUDCD2Q8WVJ2 157 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 ZNF681Q96N22 645 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 ZNF382Q96SR6 550 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 FMO2Q99518 471 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 LRMDAQ9H2I8 198 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 DSN1Q9H410 356 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 SAV1Q9H4B6 383 aaPredicted RBP5.54□□□□□ -1.52
CLK1-212ENST00000482590 RNF121Q9H920 327 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 TECRQ9NZ01 308 aaKnown RBP5.54□□□□□ -1.52
CLK1-212ENST00000482590 NAGKQ9UJ70 344 aa5.54□□□□□ -1.52
CLK1-212ENST00000482590 SONP18583 2426 aaKnown RBP5.53□□□□□ -1.52
CLK1-212ENST00000482590 KBTBD11-OT1A0A1B0GTJ5 212 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 CCT8L1PA6NM43 557 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 C17orf51A8MQB3 221 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 DEFB108AA8MXU0 73 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 ZNF732B4DXR9 585 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 C16orf97H3BN30 126 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 CCL24O00175 119 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 RAB29O14966 203 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 EMC8O43402 210 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 LY6G6DO95868 133 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 SNRPAP09012 282 aaKnown RBP5.53□□□□□ -1.52
CLK1-212ENST00000482590 UBCP0CG48 685 aaKnown RBP5.53□□□□□ -1.52
CLK1-212ENST00000482590 UGT2B10P36537 528 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 NPBWR2P48146 333 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 PCYT1AP49585 367 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 GDI2P50395 445 aaKnown RBP5.53□□□□□ -1.52
CLK1-212ENST00000482590 GAS1P54826 345 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 CTBP2P56545 445 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 B3GALT5-AS1P59052 145 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 C2orf80Q0P641 193 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 HNF4GQ14541 408 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 CASP8Q14790 479 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 ZNF678Q5SXM1 525 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 FAM219BQ5XKK7 198 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 PRSS57Q6UWY2 283 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 UNQ6126/PRO20091Q6UXV3 157 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 CYB561A3Q8NBI2 242 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 OR4D6Q8NGJ1 314 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 OR6K3Q8NGY3 331 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 OR5R1Q8NH85 324 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 FNDC9Q8TBE3 224 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 C16orf78Q8WTQ4 265 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 RNF138Q8WVD3 245 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 GTF2H4Q92759 462 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 STARD4Q96DR4 205 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 WFIKKN1Q96NZ8 548 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 UHRF2Q96PU4 802 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 SLC30A2Q9BRI3 323 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 TBL1XR1Q9BZK7 514 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 ZNF665Q9H7R5 613 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 VIPAS39Q9H9C1 493 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 RNF122Q9H9V4 155 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 NTN4Q9HB63 628 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 MED11Q9P086 117 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 SLC17A7Q9P2U7 560 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 CLN8Q9UBY8 286 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 DAPK2Q9UIK4 370 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 ZNF225Q9UK10 706 aa5.53□□□□□ -1.52
CLK1-212ENST00000482590 MCTS1Q9ULC4 181 aaKnown RBP5.53□□□□□ -1.52
CLK1-212ENST00000482590 VDAC3Q9Y277 283 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms