RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 MEGF10Q96KG7 1140 aa16.73■□□□□ 0.27
LIME1-205ENST00000480139 DUSP21Q9H596 190 aa16.73■□□□□ 0.27
LIME1-205ENST00000480139 CHODLQ9H9P2 273 aa16.73■□□□□ 0.27
LIME1-205ENST00000480139 MPC1Q9Y5U8 109 aa16.73■□□□□ 0.27
LIME1-205ENST00000480139 V9GYS6 101 aa16.73■□□□□ 0.27
LIME1-205ENST00000480139 VPS13CQ709C8 3753 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.72■□□□□ 0.27
LIME1-205ENST00000480139 ZNF816-ZNF321PA0A0X1KG74 233 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 VWC2LB2RUY7 222 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 P2RY10O00398 339 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 PTBP3O95758 552 aaKnown RBP16.72■□□□□ 0.27
LIME1-205ENST00000480139 HLA-DPB1P04440 258 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 SLC25A16P16260 332 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 ZNF12P17014 697 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 CRHBPP24387 322 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 C21orf33P30042 268 aaPredicted RBP16.72■□□□□ 0.27
LIME1-205ENST00000480139 GNALP38405 381 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 GATA4P43694 442 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 MZT1Q08AG7 82 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 RIPPLY1Q0D2K3 151 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 RIN1Q13671 783 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 ALKBH1Q13686 389 aaKnown RBP16.72■□□□□ 0.27
LIME1-205ENST00000480139 RBM48Q5RL73 367 aaKnown RBP16.72■□□□□ 0.27
LIME1-205ENST00000480139 TMEM244Q5VVB8 128 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 ZNF485Q8NCK3 441 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 YIPF5Q969M3 257 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 PIMREGQ9BSJ6 248 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 CDCA4Q9BXL8 241 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 CLEC2DQ9UHP7 191 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 RHBDD3Q9Y3P4 386 aa16.72■□□□□ 0.27
LIME1-205ENST00000480139 IGHV4-30-2A0A087WSY4 118 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 A0A1B0GVI7 797 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 OR4C45A6NMZ5 311 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 F5H5P2 479 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 IFNL4K9M1U5 179 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 SYT7O43581 403 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 COL8A2P25067 703 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 TMEM33P57088 247 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 MAB21L1Q13394 359 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 HFEQ30201 348 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 SPRNQ5BIV9 151 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 OR2G6Q5TZ20 316 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 OR14K1Q8NGZ2 314 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 RPS4Y2Q8TD47 263 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 ITLN1Q8WWA0 313 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 ERGIC1Q969X5 290 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 PAPOLGQ9BWT3 736 aaKnown RBP16.71■□□□□ 0.27
LIME1-205ENST00000480139 PAK1IP1Q9NWT1 392 aaPredicted RBP16.71■□□□□ 0.27
LIME1-205ENST00000480139 BABAM2Q9NXR7 383 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 ENPP5Q9UJA9 477 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 BLOC1S6Q9UL45 172 aa16.71■□□□□ 0.27
LIME1-205ENST00000480139 FLNAP21333 2647 aaKnown RBP16.71■□□□□ 0.27
LIME1-205ENST00000480139 LOC107986453A0A1B0GWG9 222 aa16.7■□□□□ 0.26
LIME1-205ENST00000480139 TMEM212A6NML5 194 aa16.7■□□□□ 0.26
LIME1-205ENST00000480139 PTGES3LE9PB15 166 aa16.7■□□□□ 0.26
LIME1-205ENST00000480139 E9PI62 339 aa16.7■□□□□ 0.26
LIME1-205ENST00000480139 LYNX1G3V0Z9 82 aa16.7■□□□□ 0.26
LIME1-205ENST00000480139 MYL12BO14950 172 aa16.7■□□□□ 0.26
LIME1-205ENST00000480139 LYNX1P0DP58 116 aa16.7■□□□□ 0.26
LIME1-205ENST00000480139 RPL22L1Q6P5R6 122 aaKnown RBP16.7■□□□□ 0.26
LIME1-205ENST00000480139 NANOGP1Q8N7R0 232 aa16.7■□□□□ 0.26
LIME1-205ENST00000480139 C10orf35Q96D05 121 aa16.7■□□□□ 0.26
LIME1-205ENST00000480139 ITPKCQ96DU7 683 aa16.7■□□□□ 0.26
LIME1-205ENST00000480139 GCM1Q9NP62 436 aa16.7■□□□□ 0.26
LIME1-205ENST00000480139 TRIM36Q9NQ86 728 aa16.7■□□□□ 0.26
LIME1-205ENST00000480139 ZNF275Q9NSD4 429 aaPredicted RBP16.7■□□□□ 0.26
LIME1-205ENST00000480139 C14orf119Q9NWQ9 140 aa16.7■□□□□ 0.26
LIME1-205ENST00000480139 ERGIC3Q9Y282 383 aa16.7■□□□□ 0.26
LIME1-205ENST00000480139 PIGLQ9Y2B2 252 aa16.7■□□□□ 0.26
LIME1-205ENST00000480139 PCDHGB5Q9Y5G0 923 aa16.7■□□□□ 0.26
LIME1-205ENST00000480139 TRIM64A6NGJ6 449 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 TRIM64BA6NI03 449 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 ANXA2P2A6NMY6 339 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 CDC14BO60729 498 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 NR4A2P43354 598 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 WNT4P56705 351 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 SLC3A1Q07837 685 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 PRDX4Q13162 271 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 CARTPTQ16568 116 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 ODF4Q2M2E3 257 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 ZNF181Q2M3W8 571 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 TMEM42Q69YG0 159 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 OR8S1Q8NH09 359 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 MND1Q9BWT6 205 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 UBAP1Q9NZ09 502 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 PPP1R3CQ9UQK1 317 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 DYSFO75923 2080 aa16.69■□□□□ 0.26
LIME1-205ENST00000480139 CELSR1Q9NYQ6 3014 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 ZNF850A8MQ14 1090 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 OGG1O15527 345 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 RGS10O43665 173 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 ZFPL1O95159 310 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 FAHP16930 419 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 CDH15P55291 814 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 TAS2R43P59537 309 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 CDK5R1Q15078 307 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 ZDHHC23Q8IYP9 409 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 ZNF676Q8N7Q3 588 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 Q8TCH9 128 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 GATAD2BQ8WXI9 593 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms