RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	CFL1	P23528	166 aa	Known RBP	12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	CFP	P27918	469 aa		12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	EPHA2	P29317	976 aa		12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	RPS7	P62081	194 aa	Known RBP	12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	ELF3	P78545	371 aa	Predicted RBP	12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	MZT1	Q08AG7	82 aa		12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	PTGES3	Q15185	160 aa	Known RBP	12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	ATP6AP1	Q15904	470 aa		12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	SNAPC1	Q16533	368 aa		12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	C12orf54	Q6X4T0	127 aa		12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	C9orf139	Q6ZV77	190 aa		12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	OR5K1	Q8NHB7	308 aa		12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	TEAD3	Q99594	435 aa		12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	KIF17	Q9P2E2	1029 aa		12.48	□□□□□ -0.41
CCNL1-222	ENST00000479596	IGHV3OR15-7	A0A075B7D8	119 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	TRAV38-1	A0A0B4J264	116 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	TRAV40	A0A0B4J280	105 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596		A0A1B0GW55	424 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	hCG_1807616	A0A1W2PRN6	198 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	DNAJC9-AS1	A6NH13	148 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	HAX1	O00165	279 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	ADAM20	O43506	726 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	MRPL3	P09001	348 aa	Known RBP	12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	DUX4L2	P0CJ85	424 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	DUX4L3	P0CJ86	424 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	DUX4L4	P0CJ87	422 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	DUX4L5	P0CJ88	424 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	DUX4L6	P0CJ89	424 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	DUX4L7	P0CJ90	424 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	NPY4R	P50391	375 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	FGF12	P61328	243 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	EFNB1	P98172	346 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	POU4F2	Q12837	409 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	KCNJ8	Q15842	424 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	DUX4L9	Q6RFH8	374 aa	Predicted RBP	12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	WDR82	Q6UXN9	313 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	BCDIN3D	Q7Z5W3	292 aa	Known RBP	12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	GALNT4	Q8N4A0	578 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	CSNK2A3	Q8NEV1	391 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	LRRC29	Q8WV35	223 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	HPSE2	Q8WWQ2	592 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	TECTB	Q96PL2	329 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	DUX5	Q96PT3	197 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	PAPOLG	Q9BWT3	736 aa	Known RBP	12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	YIPF3	Q9GZM5	350 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	RASSF4	Q9H2L5	321 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	FAM206A	Q9NX38	181 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	DUX4	Q9UBX2	424 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	LAMP5	Q9UJQ1	280 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	COPS3	Q9UNS2	423 aa		12.47	□□□□□ -0.41
CCNL1-222	ENST00000479596	PSMD9	O00233	223 aa		12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	ENSA	O43768	121 aa	Known RBP	12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	CST4	P01036	141 aa		12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	ESRRG	P62508	458 aa		12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	KDM4D	Q6B0I6	523 aa		12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	FGFRL1	Q8N441	504 aa		12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	OR5P3	Q8WZ94	311 aa		12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	GCDH	Q92947	438 aa	Predicted RBP	12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	SEH1L	Q96EE3	360 aa		12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	DUS3L	Q96G46	650 aa	Known RBP	12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	TEX12	Q9BXU0	123 aa		12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	MS4A7	Q9GZW8	240 aa	Predicted RBP	12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	GABARAPL1	Q9H0R8	117 aa		12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	NIPAL2	Q9H841	368 aa		12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	RNPEPL1	Q9HAU8	725 aa		12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	TRIM36	Q9NQ86	728 aa		12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	ERVK-18	Q9QC07	812 aa		12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	KAAG1	Q9UBP8	84 aa		12.46	□□□□□ -0.41
CCNL1-222	ENST00000479596	DOCK11	Q5JSL3	2073 aa		12.46	□□□□□ -0.42
CCNL1-222	ENST00000479596	MDFIC2	A0A1B0GVS7	189 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	ZAR1L	A6NP61	321 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	ZNF850	A8MQ14	1090 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	CDIPT	O14735	213 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	NDUFA2	O43678	99 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	IGLV3-1	P01715	115 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	SFTPB	P07988	381 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	MMP9	P14780	707 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	AMY2B	P19961	511 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	PRTN3	P24158	256 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	CFHR2	P36980	270 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	GNAL	P38405	381 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	ROM1	Q03395	351 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	PRDX4	Q13162	271 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	AADACL4	Q5VUY2	407 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	SLX4IP	Q5VYV7	408 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	C12orf73	Q69YU5	71 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	DEGS2	Q6QHC5	323 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	RBMS3	Q6XE24	437 aa	Known RBP	12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	KRT74	Q7RTS7	529 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	KRT77	Q7Z794	578 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	TBX15	Q96SF7	602 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	PKP2	Q99959	881 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	TTTY10	Q9BZA0	68 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	KRT84	Q9NSB2	600 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	ZNF391	Q9UJN7	358 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	MPC1	Q9Y5U8	109 aa		12.45	□□□□□ -0.42
CCNL1-222	ENST00000479596	TRRAP	Q9Y4A5	3859 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596	SRRM5	B3KS81	715 aa		12.44	□□□□□ -0.42
CCNL1-222	ENST00000479596		G3V2T6	193 aa		12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms