RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 RHOVQ96L33 236 aa12.11□□□□□ -0.47
USP42-206ENST00000479544 CMTM3Q96MX0 182 aa12.11□□□□□ -0.47
USP42-206ENST00000479544 ASB16Q96NS5 453 aa12.11□□□□□ -0.47
USP42-206ENST00000479544 CABLES2Q9BTV7 478 aa12.11□□□□□ -0.47
USP42-206ENST00000479544 PBOV1Q9GZY1 135 aa12.11□□□□□ -0.47
USP42-206ENST00000479544 PLK3Q9H4B4 646 aa12.11□□□□□ -0.47
USP42-206ENST00000479544 CUTCQ9NTM9 273 aa12.11□□□□□ -0.47
USP42-206ENST00000479544 DVL1P1P54792 670 aaPredicted RBP12.1□□□□□ -0.47
USP42-206ENST00000479544 HNRNPKP61978 463 aaKnown RBP eCLIP12.1□□□□□ -0.47
USP42-206ENST00000479544 DLX2Q07687 328 aaPredicted RBP12.1□□□□□ -0.47
USP42-206ENST00000479544 ARL6IP1Q15041 203 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 MRPL38Q96DV4 380 aaKnown RBP12.1□□□□□ -0.47
USP42-206ENST00000479544 TMPRSS5Q9H3S3 457 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 WASF3Q9UPY6 502 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 PIGLQ9Y2B2 252 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 RBBP6Q7Z6E9 1792 aaKnown RBP12.1□□□□□ -0.47
USP42-206ENST00000479544 ZIC2O95409 532 aaPredicted RBP12.1□□□□□ -0.47
USP42-206ENST00000479544 SERPINA7P05543 415 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 EDN3P14138 238 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 FAHP16930 419 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 SPINK2P20155 84 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 MFAP5Q13361 173 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 TMEM268Q5VZI3 342 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 MOB3CQ70IA8 216 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 GKN2Q86XP6 184 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 KISS1RQ969F8 398 aaPredicted RBP12.1□□□□□ -0.47
USP42-206ENST00000479544 PHYHIPLQ96FC7 376 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 MRPS18BQ9Y676 258 aaKnown RBP12.1□□□□□ -0.47
USP42-206ENST00000479544 FREM3P0C091 2139 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 A0A1W2PR80 420 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 AP4M1O00189 453 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 DDAH2O95865 285 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 NKX2-1P43699 371 aaPredicted RBP12.1□□□□□ -0.47
USP42-206ENST00000479544 SRYQ05066 204 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 TMEM240Q5SV17 173 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 BAHD1Q8TBE0 780 aaPredicted RBP12.1□□□□□ -0.47
USP42-206ENST00000479544 ZNF845Q96IR2 970 aaPredicted RBP12.1□□□□□ -0.47
USP42-206ENST00000479544 THOC3Q96J01 351 aaKnown RBP12.1□□□□□ -0.47
USP42-206ENST00000479544 PRO3102Q9H379 93 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 FAM60AQ9NP50 221 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 OR5AC2Q9NZP5 309 aa12.1□□□□□ -0.47
USP42-206ENST00000479544 A0A1W2PP11 408 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 OTOL1A6NHN0 477 aaPredicted RBP12.09□□□□□ -0.47
USP42-206ENST00000479544 CD300LBA8K4G0 201 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 OR2A4O95047 310 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 IGHV3-9P01782 118 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 CTHP32929 405 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 HSF1Q00613 529 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 MESTQ5EB52 335 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 TFAP2EQ6VUC0 442 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 NPSR1Q6W5P4 371 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 PHOSPHO2Q8TCD6 241 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 GPX8Q8TED1 209 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 OR2A7Q96R45 310 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 SPSB2Q99619 263 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 COL25A1Q9BXS0 654 aaPredicted RBP12.09□□□□□ -0.47
USP42-206ENST00000479544 CES1P1Q9UKY3 287 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 NYNRINQ9P2P1 1898 aaKnown RBP12.09□□□□□ -0.47
USP42-206ENST00000479544 LINC01553A4QN01 128 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 TK1P04183 234 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 ZNF528Q3MIS6 628 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 PLCXD3Q63HM9 321 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 OR8G2PQ6IF36 304 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 H1FNTQ75WM6 255 aaPredicted RBP12.09□□□□□ -0.47
USP42-206ENST00000479544 LGI3Q8N145 548 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 ZNF383Q8NA42 475 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 OR8U1Q8NH10 309 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 TMEM37Q8WXS4 190 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 BMFQ96LC9 184 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 SAMD10Q9BYL1 202 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 NCOR1O75376 2440 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 A0A1W2PPQ1 181 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 H3BMH7 237 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 GREM1O60565 184 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 FAM157BP0CG42 384 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 NR2C1P13056 603 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 RPS2P15880 293 aaKnown RBP12.09□□□□□ -0.47
USP42-206ENST00000479544 RAB5AP20339 215 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 IL10RAQ13651 578 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 ZIC1Q15915 447 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 SKA3Q8IX90 412 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 BHLHE23Q8NDY6 225 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.09□□□□□ -0.47
USP42-206ENST00000479544 SLC25A31Q9H0C2 315 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 ZNF286AQ9HBT8 521 aa12.09□□□□□ -0.47
USP42-206ENST00000479544 KIR2DS5A0A0G2JLQ3 304 aa12.08□□□□□ -0.47
USP42-206ENST00000479544 A0A0G2JNG1 304 aa12.08□□□□□ -0.47
USP42-206ENST00000479544 KIR2DS3K7RE56 304 aa12.08□□□□□ -0.47
USP42-206ENST00000479544 LMX1BO60663 402 aa12.08□□□□□ -0.47
USP42-206ENST00000479544 ACTL6AO96019 429 aa12.08□□□□□ -0.47
USP42-206ENST00000479544 GSK3AP49840 483 aa12.08□□□□□ -0.47
USP42-206ENST00000479544 KIR2DS5Q14953 304 aa12.08□□□□□ -0.47
USP42-206ENST00000479544 C5orf46Q6UWT4 87 aa12.08□□□□□ -0.47
USP42-206ENST00000479544 DGAT2L6Q6ZPD8 337 aa12.08□□□□□ -0.47
USP42-206ENST00000479544 THNSL2Q86YJ6 484 aa12.08□□□□□ -0.47
USP42-206ENST00000479544 OR56B2PQ8NGI1 322 aa12.08□□□□□ -0.47
USP42-206ENST00000479544 EMG1Q92979 244 aaKnown RBP12.08□□□□□ -0.47
USP42-206ENST00000479544 SPTSSAQ969W0 71 aa12.08□□□□□ -0.47
USP42-206ENST00000479544 TEX101Q9BY14 249 aa12.08□□□□□ -0.47
USP42-206ENST00000479544 SEC11CQ9BY50 192 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms