RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 SURF2Q15527 256 aaPredicted RBP21.7■■□□□ 1.06
SYNGAP1-206ENST00000479510 TMEM176BQ3YBM2 270 aaPredicted RBP21.7■■□□□ 1.06
SYNGAP1-206ENST00000479510 C10orf128Q5T292 105 aa21.7■■□□□ 1.06
SYNGAP1-206ENST00000479510 Q6ZSR3 168 aa21.7■■□□□ 1.06
SYNGAP1-206ENST00000479510 TMPPEQ6ZT21 453 aa21.7■■□□□ 1.06
SYNGAP1-206ENST00000479510 FOXL2NBQ6ZUU3 175 aa21.7■■□□□ 1.06
SYNGAP1-206ENST00000479510 Q7L0L9 218 aa21.7■■□□□ 1.06
SYNGAP1-206ENST00000479510 RNF144BQ7Z419 303 aa21.7■■□□□ 1.06
SYNGAP1-206ENST00000479510 DCUN1D4Q92564 292 aa21.7■■□□□ 1.06
SYNGAP1-206ENST00000479510 TMEM230Q96A57 120 aa21.7■■□□□ 1.06
SYNGAP1-206ENST00000479510 ARHGAP5-AS1Q96IT6 56 aa21.7■■□□□ 1.06
SYNGAP1-206ENST00000479510 RNF126Q9BV68 326 aa21.7■■□□□ 1.06
SYNGAP1-206ENST00000479510 TMEM100Q9NV29 134 aa21.7■■□□□ 1.06
SYNGAP1-206ENST00000479510 PRELID1Q9Y255 219 aa21.7■■□□□ 1.06
SYNGAP1-206ENST00000479510 PHF3Q92576 2039 aaKnown RBP21.7■■□□□ 1.06
SYNGAP1-206ENST00000479510 IGKV1-9A0A0C4DH69 117 aa21.69■■□□□ 1.06
SYNGAP1-206ENST00000479510 C13orf42A0A1B0GVH6 325 aa21.69■■□□□ 1.06
SYNGAP1-206ENST00000479510 FOXI3A8MTJ6 420 aaPredicted RBP21.69■■□□□ 1.06
SYNGAP1-206ENST00000479510 NAT2P11245 290 aa21.69■■□□□ 1.06
SYNGAP1-206ENST00000479510 AMY2BP19961 511 aa21.69■■□□□ 1.06
SYNGAP1-206ENST00000479510 GUCA1AP43080 201 aaPredicted RBP21.69■■□□□ 1.06
SYNGAP1-206ENST00000479510 CCDC157Q569K6 752 aa21.69■■□□□ 1.06
SYNGAP1-206ENST00000479510 GTPBP8Q8N3Z3 284 aaPredicted RBP21.69■■□□□ 1.06
SYNGAP1-206ENST00000479510 C10orf35Q96D05 121 aa21.69■■□□□ 1.06
SYNGAP1-206ENST00000479510 LRRC46Q96FV0 321 aa21.69■■□□□ 1.06
SYNGAP1-206ENST00000479510 SOX7Q9BT81 388 aa21.69■■□□□ 1.06
SYNGAP1-206ENST00000479510 BANF2Q9H503 90 aa21.69■■□□□ 1.06
SYNGAP1-206ENST00000479510 RAD51DO75771 328 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 PGAM2P15259 253 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 MSR1P21757 451 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 IGFBP4P22692 258 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 MC2RQ01718 297 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 ARFRP1Q13795 201 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 PLEKHN1Q494U1 663 aaPredicted RBP21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 RTN4RL2Q86UN3 420 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 TDHQ8IZJ6 230 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 GJC3Q8NFK1 279 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 PP6455Q8WZ26 134 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 PGAM5Q96HS1 289 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 IGHV5-10-1A0A0J9YXX1 117 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 H3F3AP84243 136 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 PRSS54Q6PEW0 395 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 CLEC18BQ6UXF7 455 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 BAP18Q8IXM2 172 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 ARMC10Q8N2F6 343 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 OR5T2Q8NGG2 359 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 PCDHB10Q9UN67 800 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 OSGIN2Q9Y236 505 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 CHCHD2Q9Y6H1 151 aaPredicted RBP21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 V9GYS6 101 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 A0A0C4DFX4 3053 aa21.68■■□□□ 1.06
SYNGAP1-206ENST00000479510 SERPINE3A8MV23 424 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 DNASE2O00115 360 aaPredicted RBP21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 APOC1P02654 83 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 PTGFRP43088 359 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 NPY4RP50391 375 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 KISS1Q15726 138 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 SGCAQ16586 387 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 SLC16A14Q7RTX9 510 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 ZNF416Q9BWM5 594 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 TM2D1Q9BX74 207 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 NELFAQ9H3P2 528 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 RALGAPA1Q6GYQ0 2036 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 FIGNL2A6NMB9 653 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 VAMP5O95183 116 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 OPN1LWP04000 364 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 SFTPDP35247 375 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 OR3A2P47893 321 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 STK11Q15831 433 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 MRPL14Q6P1L8 145 aaKnown RBP21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 ATRAIDQ6UW56 229 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 PPP1R3BQ86XI6 285 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 OR51T1Q8NGJ9 327 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 TMEM54Q969K7 222 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 RTBDNQ9BSG5 229 aaPredicted RBP21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 WDR54Q9H977 334 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 WNT16Q9UBV4 365 aa21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 NXT1Q9UKK6 140 aaKnown RBP21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 SPTBN5Q9NRC6 3674 aaKnown RBP21.67■■□□□ 1.06
SYNGAP1-206ENST00000479510 A0A1W2PQM1 296 aa21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 EIF1BO60739 113 aaKnown RBP21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 RAMP1O60894 148 aa21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 PET100P0DJ07 73 aa21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 CD79AP11912 226 aa21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 EPHA8P29322 1005 aaPredicted RBP21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 ECI1P42126 302 aa21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 SLC6A9P48067 706 aa21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 CSNK1A1P48729 337 aa21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 CLDN17P56750 224 aa21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 HIST1H3AP68431 136 aa21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 HIST2H3PS2Q5TEC6 136 aa21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 GUSBP11Q6P575 273 aa21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 HIST2H3AQ71DI3 136 aa21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 RNF141Q8WVD5 230 aa21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 SLC6A15Q9H2J7 730 aa21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 UBE2ZQ9H832 354 aaPredicted RBP21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 DNAJB11Q9UBS4 358 aa21.66■■□□□ 1.06
SYNGAP1-206ENST00000479510 LOC102723996A0A087X1L8 192 aa21.65■■□□□ 1.06
SYNGAP1-206ENST00000479510 DHRS3O75911 302 aa21.65■■□□□ 1.06
SYNGAP1-206ENST00000479510 CCL7P80098 99 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms