RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 IER2Q9BTL4 223 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 SRMSQ9H3Y6 488 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 TMEM131Q92545 1883 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 A0A087WWC5 75 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 A0A1B0GV90 55 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 A0A1W2PPC4 97 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 ARG1P05089 322 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 ZNF708P17019 499 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 TCEA2Q15560 299 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 SSX2Q16385 188 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 HIST2H3PS2Q5TEC6 136 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 FIGLAQ6QHK4 219 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 CSNK1A1LQ8N752 337 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 CMBLQ96DG6 245 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 ABHD6Q9BV23 337 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 CNTD2Q9H8S5 307 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 C1orf123Q9NWV4 160 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 PLA2G2EQ9NZK7 142 aa13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 VSX1Q9NZR4 365 aaPredicted RBP13.55□□□□□ -0.24
CLSTN1-205ENST00000477264 IGLV1-36A0A0B4J1U3 117 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 PRSS37A4D1T9 235 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 IFITM10A6NMD0 228 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 ZNF587BE7ETH6 402 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 ADAM10O14672 748 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 SYT7O43581 403 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 ZNF354AO60765 605 aaPredicted RBP13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 DEDDO75618 318 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 YIF1AO95070 293 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 CD63P08962 238 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 ECI1P42126 302 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 ID4P47928 161 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 CXCL12P48061 93 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 CAMLGP49069 296 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 CLDN6P56747 220 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 SLC35A1P78382 337 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 ZNF574Q6ZN55 896 aaPredicted RBP13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 LHFPL1Q86WI0 220 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 C19orf47Q8N9M1 422 aaKnown RBP13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 OR9A4Q8NGU2 314 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 OR5H2Q8NGV7 314 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 SPACA7Q96KW9 195 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 C5orf34Q96MH7 638 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 C2orf88Q9BSF0 95 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 PPP1R14DQ9NXH3 145 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 TUBD1Q9UJT1 453 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 SLC5A6Q9Y289 635 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 A0A0A6YYC8 382 aaPredicted RBP13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 TMEM14DPA8MWL7 114 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 I3L1I5 382 aaPredicted RBP13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 RNF224P0DH78 156 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 THEGLP0DJG4 465 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 DAOP14920 347 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 GNB3P16520 340 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 LMO1P25800 156 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 DDTP30046 118 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 RPS10P46783 165 aaKnown RBP13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 EGR4Q05215 589 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 FNDC7Q5VTL7 733 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 RPUSD3Q6P087 351 aaKnown RBP13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 DCXRQ7Z4W1 244 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 ARHGEF39Q8N4T4 335 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 BCORP1Q8N888 145 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 EMG1Q92979 244 aaKnown RBP13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 MUCL1Q96DR8 90 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 PRRX2Q99811 253 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 GINS3Q9BRX5 216 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 C20orf24Q9BUV8 137 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 C19orf12Q9NSK7 152 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 MRPL22Q9NWU5 206 aaKnown RBP13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 DOK5Q9P104 306 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 LRIT1Q9P2V4 623 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 OR52A1Q9UKL2 312 aa13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 MRPS2Q9Y399 296 aaKnown RBP13.54□□□□□ -0.24
CLSTN1-205ENST00000477264 TGOLN2O43493 480 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 GMFGO60234 142 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 TNFP01375 233 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 VSIG8P0DPA2 414 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 NPY4RP50391 375 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 NDUFA6P56556 154 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 TAS2R46P59540 309 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 RPL27P61353 136 aaKnown RBP13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 HSD11B2P80365 405 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 ZNF117Q03924 483 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 ZNF616Q08AN1 781 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 SKP2Q13309 424 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 ZNF529Q6P280 563 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 DEGS2Q6QHC5 323 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 DGAT2L6Q6ZPD8 337 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 ZNF519Q8TB69 540 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 CD300LFQ8TDQ1 290 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 METTL21AQ8WXB1 218 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 MARS2Q96GW9 593 aaKnown RBP13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 RTBDNQ9BSG5 229 aaPredicted RBP13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 PCED1AQ9H1Q7 454 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 G6PC2Q9NQR9 355 aa13.53□□□□□ -0.24
CLSTN1-205ENST00000477264 CXorf65A6NEN9 183 aa13.52□□□□□ -0.24
CLSTN1-205ENST00000477264 H0YGG7 62 aa13.52□□□□□ -0.24
CLSTN1-205ENST00000477264 ARF3P61204 181 aaPredicted RBP13.52□□□□□ -0.24
CLSTN1-205ENST00000477264 BIKQ13323 160 aa13.52□□□□□ -0.24
CLSTN1-205ENST00000477264 C14orf28Q4W4Y0 310 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms