RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 VIMP08670 466 aaKnown RBP12.2□□□□□ -0.46
SMG5-204ENST00000476954 OR1E2P47887 323 aa12.2□□□□□ -0.46
SMG5-204ENST00000476954 MXRA7P84157 204 aa12.2□□□□□ -0.46
SMG5-204ENST00000476954 KRR1Q13601 381 aaKnown RBP12.2□□□□□ -0.46
SMG5-204ENST00000476954 SLC18B1Q6NT16 456 aa12.2□□□□□ -0.46
SMG5-204ENST00000476954 PTCHD4Q6ZW05 846 aa12.2□□□□□ -0.46
SMG5-204ENST00000476954 TSEN54Q7Z6J9 526 aaKnown RBP12.2□□□□□ -0.46
SMG5-204ENST00000476954 OAFQ86UD1 273 aa12.2□□□□□ -0.46
SMG5-204ENST00000476954 NRMQ8IXM6 262 aa12.2□□□□□ -0.46
SMG5-204ENST00000476954 ZNRF1Q8ND25 227 aa12.2□□□□□ -0.46
SMG5-204ENST00000476954 OR51D1Q8NGF3 324 aa12.2□□□□□ -0.46
SMG5-204ENST00000476954 OR8S1Q8NH09 359 aa12.2□□□□□ -0.46
SMG5-204ENST00000476954 SLC26A7Q8TE54 656 aa12.2□□□□□ -0.46
SMG5-204ENST00000476954 MED30Q96HR3 178 aa12.2□□□□□ -0.46
SMG5-204ENST00000476954 ATF6BQ99941 703 aa12.2□□□□□ -0.46
SMG5-204ENST00000476954 KCNK9Q9NPC2 374 aa12.2□□□□□ -0.46
SMG5-204ENST00000476954 SORL1Q92673 2214 aa12.2□□□□□ -0.46
SMG5-204ENST00000476954 EFCAB9A8MZ26 197 aa12.19□□□□□ -0.46
SMG5-204ENST00000476954 AHCYL1O43865 530 aa12.19□□□□□ -0.46
SMG5-204ENST00000476954 ACAA1P09110 424 aaPredicted RBP12.19□□□□□ -0.46
SMG5-204ENST00000476954 CCL3L1P16619 93 aa12.19□□□□□ -0.46
SMG5-204ENST00000476954 NAA10P41227 235 aaPredicted RBP12.19□□□□□ -0.46
SMG5-204ENST00000476954 RPL23AP62750 156 aaKnown RBP12.19□□□□□ -0.46
SMG5-204ENST00000476954 BLOC1S3Q6QNY0 202 aa12.19□□□□□ -0.46
SMG5-204ENST00000476954 DLEU7Q6UYE1 221 aa12.19□□□□□ -0.46
SMG5-204ENST00000476954 PATL1Q86TB9 770 aaKnown RBP12.19□□□□□ -0.46
SMG5-204ENST00000476954 TMEM185AQ8NFB2 350 aa12.19□□□□□ -0.46
SMG5-204ENST00000476954 OR5K1Q8NHB7 308 aa12.19□□□□□ -0.46
SMG5-204ENST00000476954 SPDL1Q96EA4 605 aa12.19□□□□□ -0.46
SMG5-204ENST00000476954 DNTTIP1Q9H147 329 aa12.19□□□□□ -0.46
SMG5-204ENST00000476954 EDA2RQ9HAV5 297 aa12.19□□□□□ -0.46
SMG5-204ENST00000476954 CORO2BQ9UQ03 480 aa12.19□□□□□ -0.46
SMG5-204ENST00000476954 KIAA1109Q2LD37 5005 aa12.19□□□□□ -0.46
SMG5-204ENST00000476954 M0R135 149 aa12.18□□□□□ -0.46
SMG5-204ENST00000476954 SOCS2O14508 198 aa12.18□□□□□ -0.46
SMG5-204ENST00000476954 AKR7A2O43488 359 aa12.18□□□□□ -0.46
SMG5-204ENST00000476954 ARG1P05089 322 aa12.18□□□□□ -0.46
SMG5-204ENST00000476954 MYCNOSP40205 109 aa12.18□□□□□ -0.46
SMG5-204ENST00000476954 MDH1P40925 334 aaKnown RBP12.18□□□□□ -0.46
SMG5-204ENST00000476954 GABRA2P47869 451 aa12.18□□□□□ -0.46
SMG5-204ENST00000476954 TPTEP56180 551 aa12.18□□□□□ -0.46
SMG5-204ENST00000476954 RAB25P57735 213 aa12.18□□□□□ -0.46
SMG5-204ENST00000476954 MTPNP58546 118 aa12.18□□□□□ -0.46
SMG5-204ENST00000476954 MZT1Q08AG7 82 aa12.18□□□□□ -0.46
SMG5-204ENST00000476954 RFX4Q33E94 735 aa12.18□□□□□ -0.46
SMG5-204ENST00000476954 ABCA11PQ4W5N1 156 aa12.18□□□□□ -0.46
SMG5-204ENST00000476954 TMEM200BQ69YZ2 307 aa12.18□□□□□ -0.46
SMG5-204ENST00000476954 OR2W3Q7Z3T1 314 aa12.18□□□□□ -0.46
SMG5-204ENST00000476954 ZNF799Q96GE5 643 aa12.18□□□□□ -0.46
SMG5-204ENST00000476954 SMAD5-AS1Q9Y6J3 95 aa12.18□□□□□ -0.46
SMG5-204ENST00000476954 ODF3BA8MYP8 253 aa12.17□□□□□ -0.46
SMG5-204ENST00000476954 CDC42EP2O14613 210 aa12.17□□□□□ -0.46
SMG5-204ENST00000476954 JTBO76095 146 aa12.17□□□□□ -0.46
SMG5-204ENST00000476954 GPR4P46093 362 aa12.17□□□□□ -0.46
SMG5-204ENST00000476954 SLC25A1P53007 311 aa12.17□□□□□ -0.46
SMG5-204ENST00000476954 WDR4P57081 412 aaKnown RBP12.17□□□□□ -0.46
SMG5-204ENST00000476954 ZNF329Q86UD4 541 aa12.17□□□□□ -0.46
SMG5-204ENST00000476954 BCAS4Q8TDM0 211 aa12.17□□□□□ -0.46
SMG5-204ENST00000476954 RPL3LQ92901 407 aaKnown RBP12.17□□□□□ -0.46
SMG5-204ENST00000476954 MALSU1Q96EH3 234 aa12.17□□□□□ -0.46
SMG5-204ENST00000476954 NMNAT1Q9HAN9 279 aaPredicted RBP12.17□□□□□ -0.46
SMG5-204ENST00000476954 CCDC167Q9P0B6 97 aa12.17□□□□□ -0.46
SMG5-204ENST00000476954 SCOCQ9UIL1 159 aa12.17□□□□□ -0.46
SMG5-204ENST00000476954 HILPDAQ9Y5L2 63 aa12.17□□□□□ -0.46
SMG5-204ENST00000476954 N6AMT1Q9Y5N5 214 aa12.17□□□□□ -0.46
SMG5-204ENST00000476954 IGKV1D-17A0A075B6S4 117 aa12.16□□□□□ -0.46
SMG5-204ENST00000476954 IGLV1-36A0A0B4J1U3 117 aa12.16□□□□□ -0.46
SMG5-204ENST00000476954 NUDT19A8MXV4 375 aa12.16□□□□□ -0.46
SMG5-204ENST00000476954 SLC2A1P11166 492 aa12.16□□□□□ -0.46
SMG5-204ENST00000476954 CD24P25063 80 aa12.16□□□□□ -0.46
SMG5-204ENST00000476954 CDKN2AP42771 156 aaKnown RBP12.16□□□□□ -0.46
SMG5-204ENST00000476954 DYNLT3P51808 116 aa12.16□□□□□ -0.46
SMG5-204ENST00000476954 PRKCDQ05655 676 aa12.16□□□□□ -0.46
SMG5-204ENST00000476954 ZNF273Q14593 569 aa12.16□□□□□ -0.46
SMG5-204ENST00000476954 SLC26A10Q8NG04 563 aa12.16□□□□□ -0.46
SMG5-204ENST00000476954 FOXRED1Q96CU9 486 aaPredicted RBP12.16□□□□□ -0.46
SMG5-204ENST00000476954 PAIP2Q9BPZ3 127 aaKnown RBP12.16□□□□□ -0.46
SMG5-204ENST00000476954 TLNRD1Q9H1K6 362 aa12.16□□□□□ -0.46
SMG5-204ENST00000476954 RHCGQ9UBD6 479 aa12.16□□□□□ -0.46
SMG5-204ENST00000476954 TBL2Q9Y4P3 447 aaKnown RBP12.16□□□□□ -0.46
SMG5-204ENST00000476954 OR2AT4A6NND4 320 aa12.15□□□□□ -0.46
SMG5-204ENST00000476954 ANKRD30BLA7E2S9 258 aa12.15□□□□□ -0.46
SMG5-204ENST00000476954 FAM90A22PA8MWA6 464 aa12.15□□□□□ -0.46
SMG5-204ENST00000476954 SLC34A1Q06495 639 aa12.15□□□□□ -0.46
SMG5-204ENST00000476954 IFFO1Q0D2I5 559 aa12.15□□□□□ -0.46
SMG5-204ENST00000476954 OR6V1Q8N148 313 aa12.15□□□□□ -0.46
SMG5-204ENST00000476954 DPP10Q8N608 796 aa12.15□□□□□ -0.46
SMG5-204ENST00000476954 KLHL30-AS1Q8NEE0 82 aa12.15□□□□□ -0.46
SMG5-204ENST00000476954 OR4M1Q8NGD0 313 aa12.15□□□□□ -0.46
SMG5-204ENST00000476954 ISOC1Q96CN7 298 aa12.15□□□□□ -0.46
SMG5-204ENST00000476954 RAX2Q96IS3 184 aa12.15□□□□□ -0.46
SMG5-204ENST00000476954 POLR2J2Q9GZM3 115 aaKnown RBP12.15□□□□□ -0.46
SMG5-204ENST00000476954 POLR2J3Q9H1A7 115 aaKnown RBP12.15□□□□□ -0.46
SMG5-204ENST00000476954 SRA1Q9HD15 236 aaKnown RBP12.15□□□□□ -0.46
SMG5-204ENST00000476954 NLKQ9UBE8 527 aa12.15□□□□□ -0.46
SMG5-204ENST00000476954 ZNF222Q9UK12 451 aa12.15□□□□□ -0.46
SMG5-204ENST00000476954 A4GNTQ9UNA3 340 aa12.15□□□□□ -0.46
SMG5-204ENST00000476954 ZNF256Q9Y2P7 627 aaPredicted RBP12.15□□□□□ -0.46
SMG5-204ENST00000476954 MEX3AA1L020 520 aaKnown RBP12.14□□□□□ -0.47
SMG5-204ENST00000476954 SNNO75324 88 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms