RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 TUSC1Q2TAM9 212 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 ZNF829Q3KNS6 432 aaPredicted RBP13.55□□□□□ -0.24
COL1A1-205ENST00000476387 ZNF404Q494X3 552 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 AADACL4Q5VUY2 407 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 NLRC3Q7RTR2 1065 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 COMMD2Q86X83 199 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 SLC35F2Q8IXU6 374 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 ZNF679Q8IYX0 411 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 OR8B12Q8NGG6 310 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 FAM81AQ8TBF8 368 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 GCDHQ92947 438 aaPredicted RBP13.55□□□□□ -0.24
COL1A1-205ENST00000476387 MNTQ99583 582 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 TMEM165Q9HC07 324 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 ZNF319Q9P2F9 582 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 MIOXQ9UGB7 285 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 OR5V1Q9UGF6 321 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 COPS3Q9UNS2 423 aa13.55□□□□□ -0.24
COL1A1-205ENST00000476387 TMEM269A0A1B0GVZ9 245 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 ANXA2P2A6NMY6 339 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 ZNF670-ZNF695F2Z2N8 137 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 H3BNX3 289 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 TRAPPC2LH3BP13 241 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 EI24O14681 340 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 POLR2IP36954 125 aaKnown RBP13.54□□□□□ -0.24
COL1A1-205ENST00000476387 CXCR4P61073 352 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 SEC61A1P61619 476 aaKnown RBP13.54□□□□□ -0.24
COL1A1-205ENST00000476387 EFNB1P98172 346 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 ROM1Q03395 351 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 ZNF154Q13106 437 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 KCNJ8Q15842 424 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 FAM201AQ5SY85 155 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 BOLLQ8N9W6 283 aaKnown RBP13.54□□□□□ -0.24
COL1A1-205ENST00000476387 OR8B3Q8NGG8 313 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 NEIL1Q96FI4 390 aaPredicted RBP13.54□□□□□ -0.24
COL1A1-205ENST00000476387 OR8B4Q96RC9 309 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 OR8B2Q96RD0 313 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 TMEM246Q9BRR3 403 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 SSBP3Q9BWW4 388 aaPredicted RBP13.54□□□□□ -0.24
COL1A1-205ENST00000476387 ADGRL4Q9HBW9 690 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 ABCB9Q9NP78 766 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 TRIM36Q9NQ86 728 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 MMP26Q9NRE1 261 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 C1orf123Q9NWV4 160 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 IMPAD1Q9NX62 359 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 WARS2Q9UGM6 360 aaKnown RBP13.54□□□□□ -0.24
COL1A1-205ENST00000476387 INSIG2Q9Y5U4 225 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 AUP1Q9Y679 476 aa13.54□□□□□ -0.24
COL1A1-205ENST00000476387 ACOD1A6NK06 481 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 ALPLP05186 524 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 DCTDP32321 178 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 GNB2P62879 340 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 IL5RAQ01344 420 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 POU4F2Q12837 409 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 ARMCX4Q5H9R4 360 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 ZNF322Q6U7Q0 402 aaPredicted RBP13.53□□□□□ -0.24
COL1A1-205ENST00000476387 DCDC5Q6ZRR9 648 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 ZDHHC22Q8N966 263 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 OR51G2Q8NGK0 314 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 OR8J1Q8NGP2 316 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 MICU1Q9BPX6 476 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 MRI1Q9BV20 369 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 ESM1Q9NQ30 184 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 CLN6Q9NWW5 311 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 FAM206AQ9NX38 181 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 HAO2Q9NYQ3 351 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 USE1Q9NZ43 259 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 NUP50Q9UKX7 468 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 GTF2A1LQ9UNN4 478 aa13.53□□□□□ -0.24
COL1A1-205ENST00000476387 A0A0U1RQV5 110 aa13.52□□□□□ -0.25
COL1A1-205ENST00000476387 WNT2P09544 360 aa13.52□□□□□ -0.25
COL1A1-205ENST00000476387 CD80P33681 288 aa13.52□□□□□ -0.25
COL1A1-205ENST00000476387 PITPNBP48739 271 aa13.52□□□□□ -0.25
COL1A1-205ENST00000476387 ALDH3A2P51648 485 aa13.52□□□□□ -0.25
COL1A1-205ENST00000476387 RBMS3Q6XE24 437 aaKnown RBP13.52□□□□□ -0.25
COL1A1-205ENST00000476387 C3orf56Q8N813 242 aa13.52□□□□□ -0.25
COL1A1-205ENST00000476387 C19orf18Q8NEA5 215 aa13.52□□□□□ -0.25
COL1A1-205ENST00000476387 RFKQ969G6 155 aa13.52□□□□□ -0.25
COL1A1-205ENST00000476387 LYZL4Q96KX0 146 aa13.52□□□□□ -0.25
COL1A1-205ENST00000476387 RTL8AQ9BWD3 113 aa13.52□□□□□ -0.25
COL1A1-205ENST00000476387 MOB1AQ9H8S9 216 aa13.52□□□□□ -0.25
COL1A1-205ENST00000476387 RHBDD3Q9Y3P4 386 aa13.52□□□□□ -0.25
COL1A1-205ENST00000476387 MPC1Q9Y5U8 109 aa13.52□□□□□ -0.25
COL1A1-205ENST00000476387 TRAV38-1A0A0B4J264 116 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 PRR32B1ATL7 298 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 C3orf80F5H4A9 247 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 LGALS8O00214 317 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 PPIAL4GP0DN37 164 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 ACKR3P25106 362 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 HTR1FP30939 366 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 ATP6V1E1P36543 226 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 MAP2K3P46734 347 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 UBA52P62987 128 aaKnown RBP13.51□□□□□ -0.25
COL1A1-205ENST00000476387 PAX8Q06710 450 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 EGR3Q06889 387 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 PRDX4Q13162 271 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 SFRP4Q6FHJ7 346 aaPredicted RBP13.51□□□□□ -0.25
COL1A1-205ENST00000476387 ZNF826PQ6ZT77 177 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 DOK3Q7L591 496 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 CBR4Q8N4T8 237 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 C22orf15Q8WYQ4 148 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms