RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 PDCD11Q14690 1871 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 RALGAPA2Q2PPJ7 1873 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 CDHR4A6H8M9 788 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 H0Y8G0 127 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 H3BQ15 152 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 XKRYO14609 159 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 CXCL11O14625 94 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 HOXA3O43365 443 aaPredicted RBP4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 DNAJB6O75190 326 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 ALOX12BO75342 701 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 DUS4LO95620 317 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 COX7A2P14406 83 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 ST6GAL1P15907 406 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 TACR2P21452 398 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 MSR1P21757 451 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 DGKAP23743 735 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 MMP11P24347 488 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 CXCR3P49682 368 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF41P51814 821 aaPredicted RBP4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 EFNA5P52803 228 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 ERVS71-1P61550 626 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 C5orf64Q2M2E5 130 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 MIDNQ504T8 468 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF385BQ569K4 471 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 FBXO47Q5MNV8 452 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 TRIM40Q6P9F5 258 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 LYG2Q86SG7 212 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF101Q8IZC7 436 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 DEFB106AQ8N104 65 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 COX18Q8N8Q8 333 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 OR11L1Q8NGX0 322 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 UBTD2Q8WUN7 234 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 MITD1Q8WV92 249 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 APOBEC4Q8WW27 367 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 BCL2L2Q92843 193 aaPredicted RBP4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 ERGIC1Q969X5 290 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 PINX1Q96BK5 328 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 SEC22AQ96IW7 307 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 GNRHR2Q96P88 292 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 GINS3Q9BRX5 216 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 CHST6Q9GZX3 395 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 ZBP1Q9H171 429 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 SRD5A3Q9H8P0 318 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 NRIP3Q9NQ35 241 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 STRAPQ9Y3F4 350 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 INSL6Q9Y581 213 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 ENTPD2Q9Y5L3 495 aa4.55□□□□□ -1.68
TMEM39A-206ENST00000473684 IFITM5A6NNB3 132 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF727A8MUV8 499 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 C17orf105B2RV13 164 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 M0R296 226 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 IRAK2O43187 625 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 RAMP1O60894 148 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 JTBO76095 146 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 HLA-AP01891 365 aaKnown RBP4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 MMP2P08253 660 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ZNF286BP0CG31 522 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 PET100P0DJ07 73 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ACP5P13686 325 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ANOS1P23352 680 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 CDK2P24941 298 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 NSG1P42857 185 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 GRK6P43250 576 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 CEBPDP49716 269 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 EMP2P54851 167 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 LIM2P55344 173 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ST3GAL3Q11203 375 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 EBPQ15125 230 aaKnown RBP4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 SAMD13Q5VXD3 122 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 DMKNQ6E0U4 476 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 PWWP2BQ6NUJ5 590 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 PRSS54Q6PEW0 395 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 NRMQ8IXM6 262 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 KDM8Q8N371 416 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ZSCAN4Q8NAM6 433 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 OR4L1Q8NH43 312 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 OR4X1Q8NH49 305 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 MFSD8Q8NHS3 518 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 NFKBIDQ8NI38 313 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 SYNPRQ8TBG9 265 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 GPX8Q8TED1 209 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 TVP23CQ96ET8 276 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 REEP6Q96HR9 211 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ULBP1Q9BZM6 244 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 SLC5A7Q9GZV3 580 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 SLC25A51Q9H1U9 297 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 PLK3Q9H4B4 646 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ISG20L2Q9H9L3 353 aaKnown RBP4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 TXNRD2Q9NNW7 524 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 ZCCHC3Q9NUD5 404 aaKnown RBP4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 PLEK2Q9NYT0 353 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 RAB22AQ9UL26 194 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 OR51F1A6NGY5 319 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 FTCDNL1E5RQL4 147 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 FAM72CH0Y354 149 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 LDB2O43679 373 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 FCMRO60667 390 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 RAMP3O60896 148 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 LRATO95237 230 aa4.54□□□□□ -1.68
TMEM39A-206ENST00000473684 CT45A8P0DMV1 189 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms