RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 UBCP0CG48 685 aaKnown RBP12.8□□□□□ -0.36
SNX13-205ENST00000471744 LYNX1P0DP58 116 aa12.8□□□□□ -0.36
SNX13-205ENST00000471744 ZNF12P17014 697 aa12.8□□□□□ -0.36
SNX13-205ENST00000471744 ZNF19P17023 458 aa12.8□□□□□ -0.36
SNX13-205ENST00000471744 USF1P22415 310 aaPredicted RBP12.8□□□□□ -0.36
SNX13-205ENST00000471744 MYF6P23409 242 aa12.8□□□□□ -0.36
SNX13-205ENST00000471744 OR12D2P58182 307 aa12.8□□□□□ -0.36
SNX13-205ENST00000471744 RIPPLY1Q0D2K3 151 aa12.8□□□□□ -0.36
SNX13-205ENST00000471744 TMPRSS11AQ6ZMR5 421 aa12.8□□□□□ -0.36
SNX13-205ENST00000471744 DOK3Q7L591 496 aa12.8□□□□□ -0.36
SNX13-205ENST00000471744 KRT74Q7RTS7 529 aa12.8□□□□□ -0.36
SNX13-205ENST00000471744 PEG10Q86TG7 708 aaKnown RBP12.8□□□□□ -0.36
SNX13-205ENST00000471744 SEMA6DQ8NFY4 1073 aa12.8□□□□□ -0.36
SNX13-205ENST00000471744 OR8S1Q8NH09 359 aa12.8□□□□□ -0.36
SNX13-205ENST00000471744 TMEM80Q96HE8 168 aa12.8□□□□□ -0.36
SNX13-205ENST00000471744 PAPOLGQ9BWT3 736 aaKnown RBP12.8□□□□□ -0.36
SNX13-205ENST00000471744 RAB26Q9ULW5 256 aa12.8□□□□□ -0.36
SNX13-205ENST00000471744 CAB39Q9Y376 341 aaPredicted RBP12.8□□□□□ -0.36
SNX13-205ENST00000471744 ZNF816-ZNF321PA0A0X1KG74 233 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 A0A1B0GVI7 797 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 F5H5P2 479 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 H0YL77 283 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 PPIHO43447 177 aaKnown RBP12.79□□□□□ -0.36
SNX13-205ENST00000471744 CCL1P22362 96 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 CCR9P51686 369 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 ZNF181Q2M3W8 571 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 Q6ZSR3 168 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 BIVMQ86UB2 503 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 C1orf87Q8N0U7 546 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 OR2G2Q8NGZ5 317 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 CCL17Q92583 94 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 GGHQ92820 318 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 HPS1Q92902 700 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 RAB1CQ92928 201 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 PELI1Q96FA3 418 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 FAM71F1Q96KD3 344 aaPredicted RBP12.79□□□□□ -0.36
SNX13-205ENST00000471744 ZNF649Q9BS31 505 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 RASSF4Q9H2L5 321 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 TMEM106BQ9NUM4 274 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 SCN3BQ9NY72 215 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 PSORS1C1Q9UIG5 152 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 ENPP5Q9UJA9 477 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 SLC22A13Q9Y226 551 aa12.79□□□□□ -0.36
SNX13-205ENST00000471744 A0A096LNT2 108 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 LRRC30A6NM36 301 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 SMAD7O15105 426 aaKnown RBP12.78□□□□□ -0.36
SNX13-205ENST00000471744 PTBP3O95758 552 aaKnown RBP12.78□□□□□ -0.36
SNX13-205ENST00000471744 LIMS3P0CW19 117 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 LIMS4P0CW20 117 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 ACKR3P25106 362 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 CHN2P52757 468 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 GBX2P52951 348 aaPredicted RBP12.78□□□□□ -0.36
SNX13-205ENST00000471744 ST3GAL4Q11206 333 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 MAB21L1Q13394 359 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 WDR38Q5JTN6 314 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 C6orf141Q5SZD1 244 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 TMEM244Q5VVB8 128 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 CIARTQ8N365 385 aaPredicted RBP12.78□□□□□ -0.36
SNX13-205ENST00000471744 STX19Q8N4C7 294 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 KLHL36Q8N4N3 616 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 BPIFB6Q8NFQ5 453 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 OR11L1Q8NGX0 322 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 PPP1R14AQ96A00 147 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 C10orf35Q96D05 121 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 MICU1Q9BPX6 476 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 Q9H521 79 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 GCM1Q9NP62 436 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 RHBDD3Q9Y3P4 386 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 V9GYS6 101 aa12.78□□□□□ -0.36
SNX13-205ENST00000471744 A0A1B0GTI1 187 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 P2RY10O00398 339 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 SYT7O43581 403 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 XPNPEP2O43895 674 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 HEXAP06865 529 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 CCDC159P0C7I6 412 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 IRF2P14316 349 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 PSMB10P40306 273 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 TGM4P49221 684 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 CDH15P55291 814 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 PRDX4Q13162 271 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 ALKBH1Q13686 389 aaKnown RBP12.77□□□□□ -0.37
SNX13-205ENST00000471744 SPRNQ5BIV9 151 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 LAIR2Q6ISS4 152 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 ZDHHC23Q8IYP9 409 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 PRSS35Q8N3Z0 413 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 OR52N1Q8NH53 320 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 Q8TCH9 128 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 PIGCQ92535 297 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 HIST1H2AAQ96QV6 131 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 ZNF184Q99676 751 aaPredicted RBP12.77□□□□□ -0.37
SNX13-205ENST00000471744 SOX7Q9BT81 388 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 RTL8AQ9BWD3 113 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 FN3KRPQ9HA64 309 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 PLEKHA1Q9HB21 404 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 PIGLQ9Y2B2 252 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 TPRKBQ9Y3C4 175 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 DOCK11Q5JSL3 2073 aa12.77□□□□□ -0.37
SNX13-205ENST00000471744 TEP1Q99973 2627 aaKnown RBP12.76□□□□□ -0.37
SNX13-205ENST00000471744 CELSR1Q9NYQ6 3014 aa12.76□□□□□ -0.37
SNX13-205ENST00000471744 LOC107986453A0A1B0GWG9 222 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms