RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 DTX3Q8N9I9 347 aa15.2■□□□□ 0.02
HSPG2-208ENST00000471322 PP6455Q8WZ26 134 aa15.2■□□□□ 0.02
HSPG2-208ENST00000471322 SLC7A6Q92536 515 aa15.2■□□□□ 0.02
HSPG2-208ENST00000471322 PTX4Q96A99 478 aa15.2■□□□□ 0.02
HSPG2-208ENST00000471322 PHF21AQ96BD5 680 aa15.2■□□□□ 0.02
HSPG2-208ENST00000471322 METTL17Q9H7H0 456 aaPredicted RBP15.2■□□□□ 0.02
HSPG2-208ENST00000471322 ARHGAP21Q5T5U3 1957 aa15.2■□□□□ 0.02
HSPG2-208ENST00000471322 LINC00854A0A1B0GVQ3 168 aa15.19■□□□□ 0.02
HSPG2-208ENST00000471322 PLA2G10O15496 165 aa15.19■□□□□ 0.02
HSPG2-208ENST00000471322 EEF1E1O43324 174 aaKnown RBP15.19■□□□□ 0.02
HSPG2-208ENST00000471322 ALX3O95076 343 aa15.19■□□□□ 0.02
HSPG2-208ENST00000471322 IL2RAP01589 272 aa15.19■□□□□ 0.02
HSPG2-208ENST00000471322 PATE4P0C8F1 98 aa15.19■□□□□ 0.02
HSPG2-208ENST00000471322 BMP5P22003 454 aa15.19■□□□□ 0.02
HSPG2-208ENST00000471322 FOXF2Q12947 444 aa15.19■□□□□ 0.02
HSPG2-208ENST00000471322 GFOD2Q3B7J2 385 aa15.19■□□□□ 0.02
HSPG2-208ENST00000471322 PABPC1L2AQ5JQF8 200 aa15.19■□□□□ 0.02
HSPG2-208ENST00000471322 ZNF57Q68EA5 555 aaPredicted RBP15.19■□□□□ 0.02
HSPG2-208ENST00000471322 OR2A2Q6IF42 318 aa15.19■□□□□ 0.02
HSPG2-208ENST00000471322 TMEM53Q6P2H8 277 aa15.19■□□□□ 0.02
HSPG2-208ENST00000471322 C11orf54Q9H0W9 315 aaPredicted RBP15.19■□□□□ 0.02
HSPG2-208ENST00000471322 XRCC3O43542 346 aa15.18■□□□□ 0.02
HSPG2-208ENST00000471322 LCATP04180 440 aa15.18■□□□□ 0.02
HSPG2-208ENST00000471322 GRNP28799 593 aaKnown RBP15.18■□□□□ 0.02
HSPG2-208ENST00000471322 CHRNB4P30926 498 aa15.18■□□□□ 0.02
HSPG2-208ENST00000471322 MAP2K3P46734 347 aa15.18■□□□□ 0.02
HSPG2-208ENST00000471322 RFX2P48378 723 aa15.18■□□□□ 0.02
HSPG2-208ENST00000471322 UTS2BQ765I0 119 aa15.18■□□□□ 0.02
HSPG2-208ENST00000471322 OR13C9Q8NGT0 318 aa15.18■□□□□ 0.02
HSPG2-208ENST00000471322 FGFBP3Q8TAT2 258 aa15.18■□□□□ 0.02
HSPG2-208ENST00000471322 SMIM4Q8WVI0 70 aa15.18■□□□□ 0.02
HSPG2-208ENST00000471322 TRIM63Q969Q1 353 aa15.18■□□□□ 0.02
HSPG2-208ENST00000471322 SGK3Q96BR1 496 aa15.18■□□□□ 0.02
HSPG2-208ENST00000471322 LYZL4Q96KX0 146 aa15.18■□□□□ 0.02
HSPG2-208ENST00000471322 DOCK7Q96N67 2140 aa15.18■□□□□ 0.02
HSPG2-208ENST00000471322 C12orf49Q9H741 205 aa15.18■□□□□ 0.02
HSPG2-208ENST00000471322 RBFOX1Q9NWB1 397 aaKnown RBP15.18■□□□□ 0.02
HSPG2-208ENST00000471322 CGGBP1Q9UFW8 167 aaPredicted RBP15.18■□□□□ 0.02
HSPG2-208ENST00000471322 A0A0A6YYH2 397 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 MBD3L4A6NDZ8 208 aaPredicted RBP15.17■□□□□ 0.02
HSPG2-208ENST00000471322 MBD3L3A6NE82 208 aaPredicted RBP15.17■□□□□ 0.02
HSPG2-208ENST00000471322 MBD3L5A6NJ08 208 aaPredicted RBP15.17■□□□□ 0.02
HSPG2-208ENST00000471322 A6NJ64 397 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 PRSS44E7EML9 344 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 GABARAPH6UMI1 98 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 LYRM1O43325 122 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 CLDN14O95500 239 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 CNOT4O95628 575 aaKnown RBP15.17■□□□□ 0.02
HSPG2-208ENST00000471322 SPNP16150 400 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 RAB6AP20340 208 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 CDK2P24941 298 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 FAM214BQ7L5A3 538 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 OR52N4Q8NGI2 321 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 MBD3L2Q8NHZ7 208 aaPredicted RBP15.17■□□□□ 0.02
HSPG2-208ENST00000471322 ENKURQ8TC29 256 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 NANOS1Q8WY41 292 aaKnown RBP15.17■□□□□ 0.02
HSPG2-208ENST00000471322 ITFG2Q969R8 447 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 ZC3HAV1LQ96H79 300 aaKnown RBP15.17■□□□□ 0.02
HSPG2-208ENST00000471322 NEK6Q9HC98 313 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 PRSS50Q9UI38 385 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 MED12LQ86YW9 2145 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 INTS1Q8N201 2190 aaKnown RBP15.17■□□□□ 0.02
HSPG2-208ENST00000471322 A0A096LPE4 126 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 TMEM272A0A1B0GTI8 110 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 A0A1W2PPZ6 126 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 CENPXA8MT69 81 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 CTAG2O75638 210 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 BPNT1O95861 308 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 CEACAM8P31997 349 aaPredicted RBP15.17■□□□□ 0.02
HSPG2-208ENST00000471322 TIMP3P35625 211 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 ZNF93P35789 620 aaPredicted RBP15.17■□□□□ 0.02
HSPG2-208ENST00000471322 PTH2RP49190 550 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 TGFBR3Q03167 851 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 PLP2Q04941 152 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 C9orf135Q5VTT2 229 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 CCDC36Q8IYA8 594 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 SEMA6DQ8NFY4 1073 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 FCAMRQ8WWV6 532 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 AKAP1Q92667 903 aaKnown RBP eCLIP15.17■□□□□ 0.02
HSPG2-208ENST00000471322 YIPF5Q969M3 257 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 CNTD2Q9H8S5 307 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 ZNF224Q9NZL3 707 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 RAB22AQ9UL26 194 aa15.17■□□□□ 0.02
HSPG2-208ENST00000471322 C19orf84I3L1E1 186 aa15.16■□□□□ 0.02
HSPG2-208ENST00000471322 LDLRAD4O15165 306 aa15.16■□□□□ 0.02
HSPG2-208ENST00000471322 XRCC2O43543 280 aa15.16■□□□□ 0.02
HSPG2-208ENST00000471322 TMIGD3P0DMS9 266 aaPredicted RBP15.16■□□□□ 0.02
HSPG2-208ENST00000471322 TAS2R20P59543 309 aa15.16■□□□□ 0.02
HSPG2-208ENST00000471322 GUSBP1Q15486 140 aa15.16■□□□□ 0.02
HSPG2-208ENST00000471322 SNAI3Q3KNW1 292 aa15.16■□□□□ 0.02
HSPG2-208ENST00000471322 SFRP5Q5T4F7 317 aa15.16■□□□□ 0.02
HSPG2-208ENST00000471322 OR5AS1Q8N127 324 aa15.16■□□□□ 0.02
HSPG2-208ENST00000471322 TOMM5Q8N4H5 51 aa15.16■□□□□ 0.02
HSPG2-208ENST00000471322 OR1K1Q8NGR3 316 aa15.16■□□□□ 0.02
HSPG2-208ENST00000471322 LILRB4Q8NHJ6 448 aa15.16■□□□□ 0.02
HSPG2-208ENST00000471322 BCL2L2Q92843 193 aaPredicted RBP15.16■□□□□ 0.02
HSPG2-208ENST00000471322 REEP6Q96HR9 211 aa15.16■□□□□ 0.02
HSPG2-208ENST00000471322 C7orf50Q9BRJ6 194 aaKnown RBP15.16■□□□□ 0.02
HSPG2-208ENST00000471322 SOX7Q9BT81 388 aa15.16■□□□□ 0.02
HSPG2-208ENST00000471322 C1QTNF5Q9BXJ0 243 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms